Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0222 ATGTCGGAAGGGTTCGCGATCGAACTGTACTTGGATCCGGCGTTGGAGAATCAGGTGCTGAAGGCCTGGAACGTTCTCGCGCGCCGACAAATCACCACTCACCTCATCGAGATGGAGTCGCGCCCTCACATAACGCTCTTCTCCGCCCCCTTTCTAGAACCTTCCAAGCTCAAATCGCTTCTCAGAACCTTCGCATCCAAGCACGATCCTCTCTCTCTCTCCTTCTCCTCCGTCGGCACCTTCCCCAGCCACGCCGACAACCTCCTCTTCCTCGCGCCCACGCCCTCCCTCTCCCTCCTCGAATTCCAGTCGCACCTCTGCGACGCCATTGGCAAAGAAGGCTTTGAGATCTCCGACGATTTCGCCTTCAATTCCTGGATACCGTACTGCTCGGTCGCGCACCACGTCCCCAAAAACAGAATGCCCGAGGCTTTCTCCCTCTTGCGGGAACTCAAACTGCCGGTTTCCGGTTACGCTACGGACATCGCGCTCGTGCAGTTCTCTCCGGTTCGCGAACTCTTCTCCTTTGTGCTCGGCAACAATGTAGACTCTTGA 555 0.5712 MSEGFAIELYLDPALENQVLKAWNVLARRQITTHLIEMESRPHITLFSAPFLEPSKLKSLLRTFASKHDPLSLSFSSVGTFPSHADNLLFLAPTPSLSLLEFQSHLCDAIGKEGFEISDDFAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVSGYATDIALVQFSPVRELFSFVLGNNVDS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0222 184 PANTHER - 1 182 - -
Pvu4g0222 184 SUPERFAMILY LigT-like 5 165 IPR009097 -
Pvu4g0222 184 Pfam 2'-5' RNA ligase superfamily 41 166 - -
Pvu4g0222 184 Gene3D Cyclic phosphodiesterase 5 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0222 Pvu-Chr4 1972073 1973227 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0222 1 184 Calmodulin-binding Proteins AT5G40190 61.957 6.40e-79 231