Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0221 ATGTATCGTTGCAATGGTTGTAAATATTTTTCGATGTCGATTCCTGTGGGAGAGAGATCGGAATCAGGTGAACGGAAATCGAAGTGCGTTTCAATGTCGGAAGGGTTCGCGATCGAACTGTACTTGGATCCGGCGTTGGAGAATCAGGTGCTGAAGGCCTGGAACGTTCTCGCGCGCCGACAAATCACCACTCACCTCATCGAGATGGAGTCGCGCCCTCACATAACGCTCTTCTCCGCCCCCTTTCTAGAACCTTCCAAGCTCGAATCGCTTCTCAGAACCTTCGCATCCAAGCACGATCCTCTCTCGCTCTCCTTCTCCTCCGTCGGGACCTTCCCCAGCAACTCCGACAACCTCCTCTTCCTCGCGCCCACGCCCTCCCTCTCCCTCCTCCAATTCCAGTCGCACCTCTGCGACGCCATCAGAAAAGAAGGCCTTGAGATCTCCGACGACTTCGCCTTCAATTCCTGGATACCGTACTGCTCGGTCGCGCACCACGTCCCCAAAAACAGAATGCCCGAGGCTTTCTCCCTCTTGCGGGAACTCAAACTGCCGGTCGCCGGTTACGCTACGGACATCGCGCTCGTGCAGTTCTCTCCGGTTCGCGAACTCTTCTCCTTTGTGCTCGGCAACAATGTAGACTCCTGA 648 0.5556 MYRCNGCKYFSMSIPVGERSESGERKSKCVSMSEGFAIELYLDPALENQVLKAWNVLARRQITTHLIEMESRPHITLFSAPFLEPSKLESLLRTFASKHDPLSLSFSSVGTFPSNSDNLLFLAPTPSLSLLQFQSHLCDAIRKEGLEISDDFAFNSWIPYCSVAHHVPKNRMPEAFSLLRELKLPVAGYATDIALVQFSPVRELFSFVLGNNVDS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0221 215 PANTHER - 32 213 - -
Pvu4g0221 215 Pfam 2'-5' RNA ligase superfamily 72 197 - -
Pvu4g0221 215 Gene3D Cyclic phosphodiesterase 36 211 - -
Pvu4g0221 215 SUPERFAMILY LigT-like 36 168 IPR009097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0221 Pvu-Chr4 1966518 1968551 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0221 32 215 Calmodulin-binding Proteins AT5G40190 63.043 1.20e-79 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0221 - - pvu:PHAVU_004G019100g 432.95