Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0217 ATGATGGATAGAAGATACTTTTACAAGGATTTGCTTCCTCTGGTGGTGCTTGTTGCCAATGAATGCAATAACACAGCTTTGTTCACTCTCTTCAAAGCAGCCACTCTGCAAGGGATGAGTAGCTATGTCTTTGTCTCTTATGCCTATTCTTTGGCATTTCTTGTACTTCTTCCTGTTACTCTTCTCTACAGAAGATCAAGAGTGGTTCCCCCTCTCAGTTTTTCCATCCTTTCCAAAATTGCTGTTCTTGGAGTCATAGGGTGTTCATCTCAGATTCTGGGGTATGTTGGCATCAGTTATAGTTCTCCCACACTTTCCTCTGCAATCAGCAACCTCGCTCCTGCTTTCACCTTCATACTTGCTGTCATTTGCAGGATGGAAAAGATAGCCATAAGAAGTAGAACTACCCAGGCTAAGATTTGGGGCAGCATTATATCGATATCAGGTGCATTTATTGTGACTTTCTGCAAAGGTCAATCGATCATCATTGCTGATAATTCCCCTTCAATTCAACTTTCACAATCAAATGGCATTCTTACTTCAGTAGATAGAAATTGGGCCTTTGGTGGCCTTCTGCTGACAGGCTGCAATATACTACTTACTATATGGTTCGTTTTGCAGGTTGAAATCTTGAAGGAGTTCCCGGATGAACTAACTATGGTGTTCTTTTACAACTTGTGTGCAGCCATTGTAGCTTCAATTGTAGGTTTAATTGGGGAGAAAAATTCTAGTGCGTGGAAAATAAGACCAGATATAACCCTGATCTCTATTGTTTGCACTGGAATATTTAACAAGTTCTTGAGTAGTGCAATATATGCCTGGGGAATACACTTGAAGGGGCCTGTATATGTTGCAATGTTCAAGCCTCTCTCAATTGTTATTGCAGTTGCCATGGGTGTTATGTTCCTTGGTGATACTCTATATGTTGGAAGTTTAATTGGAGCCACAACAATATCCATTGGGTTTTATAGTGTGATGTGGGGCAAAGCAACTGAACAGAAGGAAGATGAGGAAAGGGAGGAAGATGTTAGTAGCCAGGAATCAGCAATCACTGAGAATGTTCCTCTCTTGCAAAGCCATGAAACTGTGAATTCTACAAAGAAAATAGATGGAAGGGTATAG 1122 0.4082 MMDRRYFYKDLLPLVVLVANECNNTALFTLFKAATLQGMSSYVFVSYAYSLAFLVLLPVTLLYRRSRVVPPLSFSILSKIAVLGVIGCSSQILGYVGISYSSPTLSSAISNLAPAFTFILAVICRMEKIAIRSRTTQAKIWGSIISISGAFIVTFCKGQSIIIADNSPSIQLSQSNGILTSVDRNWAFGGLLLTGCNILLTIWFVLQVEILKEFPDELTMVFFYNLCAAIVASIVGLIGEKNSSAWKIRPDITLISIVCTGIFNKFLSSAIYAWGIHLKGPVYVAMFKPLSIVIAVAMGVMFLGDTLYVGSLIGATTISIGFYSVMWGKATEQKEDEEREEDVSSQESAITENVPLLQSHETVNSTKKIDGRV* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0217 373 MobiDBLite consensus disorder prediction 347 364 - -
Pvu4g0217 373 PANTHER WAT1-RELATED PROTEIN 6 360 IPR030184 GO:0016021|GO:0022857
Pvu4g0217 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 155 - -
Pvu4g0217 373 Pfam EamA-like transporter family 191 325 IPR000620 GO:0016020|GO:0016021
Pvu4g0217 373 Pfam EamA-like transporter family 27 154 IPR000620 GO:0016020|GO:0016021
Pvu4g0217 373 PANTHER WAT1-RELATED PROTEIN 6 360 - -
Pvu4g0217 373 MobiDBLite consensus disorder prediction 333 373 - -
Pvu4g0217 373 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0217 Pvu-Chr4 1925763 1928736 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0217 2 362 Nodulin-like Gene Family AT3G28050 48.238 5.91e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0217 - - gmx:100811686 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu4g0217 4 1925763 1928736 Pvu4g0217 4 1925763 1928736 ECH