Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0216 ATGGCAAGAGAATGGTCCTTTTACAGGAATTTTCTGCCAATTTTGGTGCTTCTAGGCATTGAATGCAATGACATGGCTTTACTCACACTCTTCAAAGTAGCCTCACTGCAAGGAATGAACAGCCATGTCTTTGTGGCATATGCTTATGCTGTTGCTACCACTGTGCTTCTTCCTGTCACTTTTTTCCACAGAAGATCAAGAGGGGTTCCTCCAATCAGTTTCTCCATACTATCCAAAATAGTTCTTCTTGGGGTGATAGGAAGTTCATCTCAGATACTGGGTTATGCAGGAATCAGCTATAGTTCTCCTGCTCTTGCTTCATCAATTGGCATTCTGGTGCCTGCTTTCACTTTCATCCTTGCTGTACTCTGCAGGATGGAAAAGTTAGCTGCTAAAAGTAGGAGTAGTCAAGCTAAGGTAATGGGAAGCATAATATCAATATCAGGTGCATTTGTACTGACTTTCTACAAAGGGCCATCAATCCTCAATGCTCACAAACATCTTTCATTGTCACTTCAACAACCAATGAACTTTCTTAAATCAGAGGATGCTAGCTGGGCCACTGGTGGCATTCTGCTGATAGGTGACTACATTCTGACTTCAGTATGGTACATTTTAGAGGAGGATATCTTGAGAGTGTTCCCGGATGAACTTACTCTAGTCTTCTTTTACAGTGTTACTGCCACCATATTCACTACAACTGTGGGCTTATTTGGAGTGCCAGATGCTAGTGCTTGGAAAATAGGTCTAAATGTTTCACTGATCTCCATTGTTTGCTCAGGAATATTTGGAAAGTTAATGAGCAATGTAGTTTATGCCTGGGCACTGAATTTAAAGGGGTCTGTCTTTGTAACATCCTTCAGGCCATTTCAAATTGTCATTGCAGTGGGAATGGGTGTTATGTTCCTTGATGATACTCTGTATATCGGAAGCGTAGTTGGAGCTATAATAGTATCAATTGGCCTTTATGTTGTATTGTGGGGCAAGGCAACAGAAGAGATAGAGGAAGTTGTTGGTAGCTTGGAATCACCAACTACAGAGAATGTTCCTCTCTTGCAAAGCCAGAGGACTGAAACATCAGAAAAGATTGTTTAA 1095 0.4137 MAREWSFYRNFLPILVLLGIECNDMALLTLFKVASLQGMNSHVFVAYAYAVATTVLLPVTFFHRRSRGVPPISFSILSKIVLLGVIGSSSQILGYAGISYSSPALASSIGILVPAFTFILAVLCRMEKLAAKSRSSQAKVMGSIISISGAFVLTFYKGPSILNAHKHLSLSLQQPMNFLKSEDASWATGGILLIGDYILTSVWYILEEDILRVFPDELTLVFFYSVTATIFTTTVGLFGVPDASAWKIGLNVSLISIVCSGIFGKLMSNVVYAWALNLKGSVFVTSFRPFQIVIAVGMGVMFLDDTLYIGSVVGAIIVSIGLYVVLWGKATEEIEEVVGSLESPTTENVPLLQSQRTETSEKIV* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0216 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 49 155 - -
Pvu4g0216 364 Pfam EamA-like transporter family 26 154 IPR000620 GO:0016020|GO:0016021
Pvu4g0216 364 SUPERFAMILY Multidrug resistance efflux transporter EmrE 235 329 - -
Pvu4g0216 364 PANTHER WAT1-RELATED PROTEIN 5 354 - -
Pvu4g0216 364 PANTHER WAT1-RELATED PROTEIN 5 354 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0216 Pvu-Chr4 1916989 1920467 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0216 1 358 Nodulin-like Gene Family AT3G28050 46.092 3.27e-108 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0216 - - gmx:100790743 558.91