Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0210 ATGAAAGGGTGTGTTGAAGATTCTATATCTAGTGTTCAAAATAAAGTATGCCTATCTTGTCTCTGGCATAGAAGTTTAAGTGAAACTGCTGCTTCTGCTGCTGCTGATATAAAGGCTAGCAAACCACCAGTGCAAATTGAACACAATCAGCTTCTGATTGATGGACTGTTTGTTGATGCAGCTTCTGGAAAAACTTTTCCAACCAATGATCCTAGAACTGGAGATACAATTGCCAATGTAGCCGAAGCAGACGTTGAAGATGTAAATCGTGCTGTACGTGCTGCTCGCAAGGCTTTTGATGAGGGACCATGGCCAAAGATGACAGCTTATGAAAGATCACGAATAATTTTGCGTTGTGCTGATATATTGGAGAAACACAATGATGAAGTTGCAGCAATTGAAACATGGGATAGTGGGAAGCCTTATGAACAGGCTGCAAATGTTGAAATACCTATGGTGGTACGCTTGTTCCGATATTATGCAGGTTGGGCGGATAAAATTCATGGTTTAACAGTTCCAGCTGATGGACCATACCATGTCCAAACCTTGCATGAACCCATTGGTGTAGCAGGGCAGATTGTACCTTGGAATTTCCCACTTCTTATTTTTTCATGGAAGGTTGCACCTGCTTTAGCTTGTGGTTGTACAGTTGTAATGAAAACTGCAGAACAGACACCACTTTCTGCCCTTTATGTGTCAAAGCTATTTCTTGAGGCTGGACTTCCTCCTGGAGTTCTGAATGTTATCAGTGGCTTTGGTCCTATTGCTGGAGCAGCTCTGTGTACTCATATGGATGTTGACAAGCTTGCTTTCACAGGATCCTCTGACACCGGCAGAAGGGTACTAGAACTCTCAGCACGCAGTAACCTGAAGCCGGTAACTCTGGAGCTGGGTGGAAAATCTCCATTCATTGTCTGCAAGGATGCTGATATTGATGCAGCTGTTGAAGCGGCACATTCTGCATTATTCTTTAATCAGGGGCAATGTTGTTGTGCTGGTTCTCGCACATTTGTTCATGAAAGCATATATGATGAATTTGTGGAAAAGGCTAAAACTCGTGCTATTAAACGTGTAGTTGGAGACCCTTTCAAAAGTGGGGTTGAGCAAGGTCCTCAGATTGATTTTACACAATTCAAGAAGATCCTGAAATATATAAGATCAGGCATTGAAAGTGGTGCTACACTGGAATCTGGTGGTCAAAGAGTTGGCTCAAAAGGCTACTACATCGAACCAACTGTTTTCTCAAATGTTCAGGCATGGCACTTCCAATTAATAATGGTTCTATTTCTAAACAAGGATCTAGAGGAGGTGATAAGAAGGGCCAATGCAACTTCTTATGGCCTGGCTGCTGGAGTTTATACTCGGAATATAGACACTGCCAATACCTTGATGCGGGCATTGCGAGTTGGAACAGTATGGATCAACTGCTATGATATCTTTGATGCAGCAATACCTTTTGGTGGATATAAAATGAGTGGTCAAGGGAGAGTAAGGGGAATCTACAGCCTTAGAAGCTACCTTCAAGTTAAAGCTTGTGTCACTGCTTTGAAGAATCCTGCATGGCTCTAG 1569 0.4264 MKGCVEDSISSVQNKVCLSCLWHRSLSETAASAAADIKASKPPVQIEHNQLLIDGLFVDAASGKTFPTNDPRTGDTIANVAEADVEDVNRAVRAARKAFDEGPWPKMTAYERSRIILRCADILEKHNDEVAAIETWDSGKPYEQAANVEIPMVVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIVPWNFPLLIFSWKVAPALACGCTVVMKTAEQTPLSALYVSKLFLEAGLPPGVLNVISGFGPIAGAALCTHMDVDKLAFTGSSDTGRRVLELSARSNLKPVTLELGGKSPFIVCKDADIDAAVEAAHSALFFNQGQCCCAGSRTFVHESIYDEFVEKAKTRAIKRVVGDPFKSGVEQGPQIDFTQFKKILKYIRSGIESGATLESGGQRVGSKGYYIEPTVFSNVQAWHFQLIMVLFLNKDLEEVIRRANATSYGLAAGVYTRNIDTANTLMRALRVGTVWINCYDIFDAAIPFGGYKMSGQGRVRGIYSLRSYLQVKACVTALKNPAWL* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0210 522 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 295 302 IPR029510 GO:0016491
Pvu4g0210 522 SUPERFAMILY ALDH-like 45 514 IPR016161 GO:0016491
Pvu4g0210 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 63 511 IPR016162 GO:0016491
Pvu4g0210 522 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 323 334 IPR016160 GO:0016491
Pvu4g0210 522 Coils Coil 78 98 - -
Pvu4g0210 522 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 17 522 - -
Pvu4g0210 522 Pfam Aldehyde dehydrogenase family 57 511 IPR015590 GO:0016491
Pvu4g0210 522 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 301 483 IPR016163 GO:0016620
Pvu4g0210 522 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 17 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0210 Pvu-Chr4 1854275 1858363 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0210 26 522 Aldehyde Dehydrogenase Gene Family AT3G48000 70.635 0.0 773
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0210 K00128 - gmx:100798892 871.307