Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0206 ATGATCATGGAGCTCTCCGATTCTACCGGCGGCGAACGCAACCTCAACGCGCCGCCGCCGCCGCAGCACAACAACCACCACCAGGACGCTCGCGCAGGTCTTGGAATCGACCTCAACGAGATCCCTTCGCCTTCCTCCTTGTTCGCTGAAACCCTACCGGACTCGGTCACTGTCGACGTTGTCCGCGCGTATCACGACAACCCCGGGCCGCCTCCGGGAGCCCCCGCCGCAGTCCCCAGCGGCGGCCTCGCTAATTGCGCTGCCTGCTCCAAGCCCTGCCCCGCCGCCGCCGGGAGCCACCACCACCTCGTCGTGTGCGACGGGTGCGAGCGCGGGTTCCATCTCGCTTGCGCCGGAATTCGCGGCGGAGGACGCCAGGCCGCGAGCCTCGAGGAGTGGGTCTGCGGGGAGTGCGTCGCCGCCGGAGTGAAGAGCAAGCGGTGGCCGTTGGGAGTGAAGCAGCTGCTCGATATGAATGCTCCGCCGCCGAGCGAAGCCGAAGGCGACGGCGTCGGCGACGGAGACTCGCAGGATTTGAGAAAGCACACTCTGGGTGATAATTATTTTGGTGCCAATCCATTTGTTGCCCCTGTGACGTATTCAAACTTTTACAATGGAAATGCTACTGGCTTCCAAAAGGCTTCTGGAGGTTTGACACATACTGATAGAGTGGGTTTTGAGGATATATTGAATCATACTCAATCAATTACTAGAAGATTTGAGGAGGCTCTTAAAGATTTTATATCTGAACAACGTGGTGTACTAGAGGAAGGTTGGCGAGTGGAATTTAGACAATCAGTGAGCAGCACTGAACTATATGCCGTTTACTGTGCACCTGATGGAAAGATATTTGATTCTGTATATGAAGTAGCTTGTTATTTGGGGCTAATGTCTGGCTTCAACTCTGTTGAGTCTGAACTAAGAAATGAGAGGTCTCTTGCGTCTTTAAGTGGGTCTCTGTCTAGAAAAAAAAAGTCAACAAGATCTGCAGTGGTCAATGGTTTTGTGGAAAAACGGGGAACCATGATGAATAGTAATTGTAAGGATCCTTCCTCTGAAGGTTTAAATGTGGAATGTGCTACTACTAGGGGGAATATCCCAAAACCCTCTGAAAGTGGAAGAAAAGATGATGGACACTCCTGCCCTCCGCAATTTGAGGATGAACTTCCTCTACAGTTCAATGACTTCTTTGTTCTTTCATTGGGGAAAGTTGATGTGAGACCATCATATCATGATGTTAATCTTATCTGTCCTGTAGGTTATAAATCTTGTTGGCATGACAAGATTACTGGTTCTCTCTTTACATGTGAAGTTTTGGAGGGTGGTGATTCTGGACCTATATTTAAGATCCGAAGGTGTTCCTGTTCAGAATTTCCTGTTCCAGTTGGGTCAACCATCCTTTCAATGTCAAAATTTTGTCAACTTGTGTCTCAAGCCAATGAAGGTGAGAGAAAAACTAATGCTAGTATGGATTTGGATGATGGTGAAAGTATCCAGATGATGCTTCAAGACCCTTGTGTACCAACTGAAAATGATGTCCTAAGCTGCTCTGCAAACTTCTCAATTAGGGATTCTCATTTATCGGATGTACTACGCCCTGGTTCAGTTCAAGATAATACTATAAATTCGTTAGCTGGTAACTTGGAGTTTAATGATGGAATTGGTGAAATTTTGGTGGAAGAGCGGTCATCATGCTCTGCATGGAGAGTTATTTCTCAGAAGTTAGTTAATGTTTGCAAGGATATCTGCAACCAGAAAGGAACTCTCAAGTTCTATTGTAACCATGCTAAGAATGAAACATGCTTACATCAATGGGATTTAGGGAACGCAAAACGTGATACATACTTTACTTCGGTGGATAAATTTTGCGGTTCCCTTGGTTCAGTTGGCATTCCAGATGTAATCTATGCAGACAGTGATCTGGAAGGTATCTCTGAGGCTTTGAGAAAATGGTTGGGGCAGGATAGGTTTGGATTGGATGTTGAATTTGTTCAAGAAGTATTGGAACAGCTTCCTAATGTTGAATCTCTGCAGTATGAACTTTTAAATAATAGAGATAACAGCTCGTCCTTGCCAACAGTAGGAAATGATTTCTTAGTGGTTGAATGGAGAGATGGATCAAAATATCAGGAAGAAGCACTTCAAGGTTTATACAGGAGGTCCAAAAAGGCAAGTTTGACTGAAAAAAGCTTTAAGGATGGTCGTCGTCCACCACTTGGGAAGCCTTTATGCTCTAGGGCTCCTGGCGAGCTCATTGGTGATATTTTTCAGGCTTGGGAGCTTTTAGAGCGATTTAACGAAGTTCTGGACCTGAAAGAACCATTGTCATTAGATGATCTTGAGAAGGAACTAATTAACCCTTGGTTTGATGGATTGGATTTTCTTGAGAAATCTGAGAGGGACATGGATGAAAGTCAAGTTTTGATTTCCCAAGGAACTGATGGTAATTGCAGATCATTATTGTCCCCAAGAGTTGAAACTGGTCCATCAGGTTCCATGGAAAGTTCTCATGCATTTATTCAAATGGAAACAGAAGCAATGAAAGAGGCCGCTCAAGTTAAGCTTGCATCTTTCACTTATGCCAGATGCTTTGGTGTAACTTTGACCAAGGCACATAATTCATTGCTGAGAGTGCTAATACGTGAATTGCTATCAAGGGTGGCTGTCCTGGTGGATCCAAATTCTGAACCCGGAGAAACACGAACAAGGCGGGGAAGAAGGAAAGATATGGATAGTGGTGTTTCTGCTAAACGAACCAAGCTCAACATGCTTCCTATTAATGAATTGACCTGGCCAGAATTAGCTCGTAGGTATATCTTGGCTTTTTTAACAATGGATGGCAACCTTGAGTCTGCAGAAATTACTGCCCGCGAAAGTGGTAAAGTATTTCGCTGCTTACGAGGTGATGGTGGTGTGCTGTGTGGTTCTCTTACCGGTGTGGCTGGGATGGAAGCAGATGCACAGCTGCTTGCAGAGGCTACAAAGAAAATTTTTGGTTCTTTGAGCAGAGACAGTGATGTACTAACCATGGAAGAAGAGTCTGATGCAAAGGGTGCTTCTGAGAAGAAATTGGCAAATGATGGTAATGTTCCTGAATGGGCTCAAATGCTAGAACCTGTCAGAAAGCTACCAACAAATGTAGGCACTCGAATCAGGAAGTGTGTTTATGATGCTCTGGGTAAGGATCCGCCAGAATGGGCAAAGAAAAAACTGGAACATTCAATCAGTAAGGAAGTGTACAAGGGCAATGCTTCTGGACCAACAAAGAAAGCAGTTCTTTCAGTTTTGGCTGATGTTGCGGGTGAAGGACTGCAATCAAATCCCAGTAAAGGACAGAAAAGGAAGATTGTTATATCAATTTCTGACATCATGATGAAACGATGTCGCATTGTATTACGCCGTGCTGCTGCTGCAGATGATTCAAAGGTTTTTTGCAACTTGCTGGGAAGAAAATTGATTAATTCTTCAGATAATGATGATGAGGGGCTTCTTGGATCTCCAGCCATGGTGGCCCGCCCTCTAGACTTCCGCACTATTGACCTAAGATTAGCTGCTGGAGCTTATGGTGGATCTCATGAAGCTTTTCTTGAGGATGTTCGCGAGCTGTGGAACAATGTTCGTGTTGTTTTTGGGGATCAACCTGATTTACTCGAACTGGCTGAAAAATTATCCCAAAACTTTGAATCACTATATAATGAGGAGGTTGTCACCAATGTCCAAAAATTTATGGAGTATGCTAAACTGGAATGCTTAACTGCAGAAATGAGAAAGGAAGTTGATGATTTTATTGAGTCAATGAAAGAGACTCCAAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGCATTGATAGGGACGATGATAGTGTTTTACTATGTGATACTTGTGATGCTGAGTATCATACATATTGCTTAAACCCTCCCCTTGCAAGGATTCCTGAGGGAAACTGGTACTGTCCTTCCTGTGTTGATGGTAAACATGCAACTCAAGATGTTACAGAACGTACACAGGTTATTGGCAAATGCCGAAGTAAAAAATTCCAGGGTGAAGTTAATTCTCTTTTCTTGGAATCCCTTACTCATTTATCAACTGTAATTGAAGAAAAAGAATACTGGGAGCACAGTTTGGGCGAGAGAACTTTCCTTCTTAAATTTTTATGTGATGAGTTGCTTAACTCTTCCATGATACGCCAGCACCTTGAGCAATGTTCAGAGTTGTCAGCTGAGTTACATCAGAAATTGCGTGCACATTCTGCAGAGTGGAAAAACCTGAAAACTAGAGAGGACATTTTATCTACAAAAGCAGCTAAAATTGATACTTTCTCATTAAATACTGCTGGAGAAGTTGGTCTTAGGGAAGGGGTTACTACTTTATTAACAAATACTGGTAAATGTCTGGTTCAGCCACATACTGCAGTTGACAATCCTAGTAATTTTGGGGTATTTGTTGATAGCCTGCCTTCAGAAGAGACCACCAAGGAGAAGTATAGGTTTGATAGTGTAGATAAAAGCATGTCCGTGACAAACTCAGATTCTGATAGCCAAAATATGAATTCCTTAGATGTAGAGGGACAATTTAGAAATGTCTCTGGTGCTGTGGAGTCTCAATCAACTGATAAATCCCCCAAATCTTTTCCATCACCAAATTTGTCTCAAGAAATAAATGGTTCTGGTGGAGCAGCTCATGCCCAGAGTAACCACCAGAAATGTGAGGGGAGGGACATATCTACACCTGTGACATGCCAGCAAGGTGGGGTGACAGTTGATGCTTCACATACTGCTTTGAATGAGTCCGAACCCTATCACCTTGAGCTCAACGCTATCAAGCGTGATATTTCAGTATTGCAGGACTCCATAACTAGTGTAGTATCACAGCTGTTGAGGCTCTCTGTTCGTCGGGAGTTTTTGGGCATTGATTCCATCGGTCGATTGTATTGGGCTTCAACTTTGCCTGGAGGACGTTCACGAATAGTTGTTGATGCAAGTGCTGCACTGCTGCATGGAAGAGGAATACCATTTAGCAGAGACTATGTGGAAAAGTTTTCTGTTCTGCAGCATTCTTCACTATCTGAGAAGGATTCCTCTCAGCTTAGAAATGCTTTGGCCAATAGTTCACCATGGATTGCTTATGAAACTGATGCTGAAATTGAAGAGCTCTTAGGTTGGCTGGATGATAGTGATCCTAAAGAAAGGGAACTGAAAGATTCCATTATGCAGGGGCCAAGATCAAGATTCCAAGAGTTCCTTAATGCGCAGACTGAAGAGCAGGTTGAGGACCGAGGACCTATTTCTATGCCTATAAATAGAGAGAAAACAGTATCTAGTTCTCTTGTTACAAAGGCGACATCCTTGCTGGAAAAGAAATATGGTCCCTTCTTCGAATGGGATATTGAGATGTCAAGGAAGCAAAATAAAAAGTCAAGAACAACTAATGATGAAAAGTTGTTTAGGTGTGAGTGCCTAGAACCCATATGGTTCGATAGGAGACACTGCACATATTGTCACAAAACTGTTTCAAGTGATGGTGAATTTGATGGACATAATGATGGCAAGTGTAATGCAGGTCTTCCGGTTGCAGAGAAGAATAGGAACAAAATTGGATCTTGTAAAGGAAAAGGAAACTTAAGATGTGATACCTCACGAGAGAAATTCAGAGCTGATGCGGAAACAGCTGGAACCAAAGTTGGTGGTTGTTCTAAGCTAAGCTCAAGATTGATTAAATTTTCAAATGAAGAATCCACATGCCCATTTAATTTTGAAGATATATGTTCCAAGTTTGAGACAAGTGAATCCAACAGGGAACTTGTCAAAGAAATAGGTCTTATTGGAACGGATGGTATCCCATCCTTTGTTCCTTCTGTATCTCCTCTTGTTAGTGAGTATACACGATTCTCAACTCCAAAGGATGATGCCATTATAGGTGTTTTGTCCAAACCAACGGAAACCCGTGGTTCTCAGGGAAACACTGATGGAGCTGGTGCATGTCTTGACCATAATTCAGGCATTTCTACTGGTAGGTTAGCTGCCAATGAAATCAATAAATCCAATAAATCATCCTCGGGAGAACAAAGAGATGGGAAATTCTCTTTTTGTGGTCCTGCTTCAGATATGGGAGTCGATGGCTGCTGTGTGGTTCCTTTGTCGTCATTGAAACCATTAGTTGGAAAGGTTTCTCACATTTTGAGGCAACTGAAGATTAATCTGCTTGATATGGATGCTGCACTCCCGGCATCTGCTCTGAGACCATCAAAGGCTGAGTCTGAGAGAAGACAGGCTTGGCGTGCATTTGTGAAATCTGCAGAGACTATATATGAGATGATTCAGGCGACATTTACCCTGGAAGATATGATTAAGACGGAGTACTTGAGGAATGACTGGTGGTACTGGTCATCATTTTCAGCTGCTGCCAAAACTTCTACTTTGCCTTCCCTTGCCCTTCGCTTATACTCTCTTGATTTAGCCATTATATACGAGAAAACGCCCAATTCAACTTTTACTGACAGCTCTGAACCTTCTGGCACAGCAGAAACGAGACCACCAATGAATGTGGATACAGAGAAATCCAAAGGAAATCGGAAGTCAAACAGGAAAAGGAAGGAATCAGATGGTTGA 6615 0.4348 MIMELSDSTGGERNLNAPPPPQHNNHHQDARAGLGIDLNEIPSPSSLFAETLPDSVTVDVVRAYHDNPGPPPGAPAAVPSGGLANCAACSKPCPAAAGSHHHLVVCDGCERGFHLACAGIRGGGRQAASLEEWVCGECVAAGVKSKRWPLGVKQLLDMNAPPPSEAEGDGVGDGDSQDLRKHTLGDNYFGANPFVAPVTYSNFYNGNATGFQKASGGLTHTDRVGFEDILNHTQSITRRFEEALKDFISEQRGVLEEGWRVEFRQSVSSTELYAVYCAPDGKIFDSVYEVACYLGLMSGFNSVESELRNERSLASLSGSLSRKKKSTRSAVVNGFVEKRGTMMNSNCKDPSSEGLNVECATTRGNIPKPSESGRKDDGHSCPPQFEDELPLQFNDFFVLSLGKVDVRPSYHDVNLICPVGYKSCWHDKITGSLFTCEVLEGGDSGPIFKIRRCSCSEFPVPVGSTILSMSKFCQLVSQANEGERKTNASMDLDDGESIQMMLQDPCVPTENDVLSCSANFSIRDSHLSDVLRPGSVQDNTINSLAGNLEFNDGIGEILVEERSSCSAWRVISQKLVNVCKDICNQKGTLKFYCNHAKNETCLHQWDLGNAKRDTYFTSVDKFCGSLGSVGIPDVIYADSDLEGISEALRKWLGQDRFGLDVEFVQEVLEQLPNVESLQYELLNNRDNSSSLPTVGNDFLVVEWRDGSKYQEEALQGLYRRSKKASLTEKSFKDGRRPPLGKPLCSRAPGELIGDIFQAWELLERFNEVLDLKEPLSLDDLEKELINPWFDGLDFLEKSERDMDESQVLISQGTDGNCRSLLSPRVETGPSGSMESSHAFIQMETEAMKEAAQVKLASFTYARCFGVTLTKAHNSLLRVLIRELLSRVAVLVDPNSEPGETRTRRGRRKDMDSGVSAKRTKLNMLPINELTWPELARRYILAFLTMDGNLESAEITARESGKVFRCLRGDGGVLCGSLTGVAGMEADAQLLAEATKKIFGSLSRDSDVLTMEEESDAKGASEKKLANDGNVPEWAQMLEPVRKLPTNVGTRIRKCVYDALGKDPPEWAKKKLEHSISKEVYKGNASGPTKKAVLSVLADVAGEGLQSNPSKGQKRKIVISISDIMMKRCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVARPLDFRTIDLRLAAGAYGGSHEAFLEDVRELWNNVRVVFGDQPDLLELAEKLSQNFESLYNEEVVTNVQKFMEYAKLECLTAEMRKEVDDFIESMKETPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDGKHATQDVTERTQVIGKCRSKKFQGEVNSLFLESLTHLSTVIEEKEYWEHSLGERTFLLKFLCDELLNSSMIRQHLEQCSELSAELHQKLRAHSAEWKNLKTREDILSTKAAKIDTFSLNTAGEVGLREGVTTLLTNTGKCLVQPHTAVDNPSNFGVFVDSLPSEETTKEKYRFDSVDKSMSVTNSDSDSQNMNSLDVEGQFRNVSGAVESQSTDKSPKSFPSPNLSQEINGSGGAAHAQSNHQKCEGRDISTPVTCQQGGVTVDASHTALNESEPYHLELNAIKRDISVLQDSITSVVSQLLRLSVRREFLGIDSIGRLYWASTLPGGRSRIVVDASAALLHGRGIPFSRDYVEKFSVLQHSSLSEKDSSQLRNALANSSPWIAYETDAEIEELLGWLDDSDPKERELKDSIMQGPRSRFQEFLNAQTEEQVEDRGPISMPINREKTVSSSLVTKATSLLEKKYGPFFEWDIEMSRKQNKKSRTTNDEKLFRCECLEPIWFDRRHCTYCHKTVSSDGEFDGHNDGKCNAGLPVAEKNRNKIGSCKGKGNLRCDTSREKFRADAETAGTKVGGCSKLSSRLIKFSNEESTCPFNFEDICSKFETSESNRELVKEIGLIGTDGIPSFVPSVSPLVSEYTRFSTPKDDAIIGVLSKPTETRGSQGNTDGAGACLDHNSGISTGRLAANEINKSNKSSSGEQRDGKFSFCGPASDMGVDGCCVVPLSSLKPLVGKVSHILRQLKINLLDMDAALPASALRPSKAESERRQAWRAFVKSAETIYEMIQATFTLEDMIKTEYLRNDWWYWSSFSAAAKTSTLPSLALRLYSLDLAIIYEKTPNSTFTDSSEPSGTAETRPPMNVDTEKSKGNRKSNRKRKESDG* 2205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 362 381 - -
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 894 914 - -
Pvu4g0206 2204 CDD PHD1_Lid2p_like 1278 1323 - -
Pvu4g0206 2204 Pfam Bromodomain 1167 1222 IPR001487 GO:0005515
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 1533 1577 - -
Pvu4g0206 2204 CDD PHD_SF 86 138 - -
Pvu4g0206 2204 Gene3D - 389 500 - -
Pvu4g0206 2204 SUPERFAMILY FYVE/PHD zinc finger 1267 1328 IPR011011 -
Pvu4g0206 2204 SMART PHD_3 85 139 IPR001965 -
Pvu4g0206 2204 SMART PHD_3 1278 1324 IPR001965 -
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 2164 2182 - -
Pvu4g0206 2204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1278 1325 IPR013083 -
Pvu4g0206 2204 Pfam PHD-finger 1278 1324 IPR019787 -
Pvu4g0206 2204 ProSitePatterns Zinc finger PHD-type signature. 86 138 IPR019786 -
Pvu4g0206 2204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 144 IPR013083 -
Pvu4g0206 2204 ProSitePatterns Zinc finger PHD-type signature. 1279 1323 IPR019786 -
Pvu4g0206 2204 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1358 1402 IPR028942 -
Pvu4g0206 2204 CDD Bromodomain 1124 1231 - -
Pvu4g0206 2204 Pfam Methyl-CpG binding domain 246 297 IPR001739 GO:0003677
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 2183 2204 - -
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 9 23 - -
Pvu4g0206 2204 SUPERFAMILY Bromodomain 1113 1233 IPR036427 GO:0005515
Pvu4g0206 2204 ProSiteProfiles FYR domain FYRN motif profile. 388 441 IPR003888 GO:0005634
Pvu4g0206 2204 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 9 31 2204 - -
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 897 914 - -
Pvu4g0206 2204 ProSiteProfiles Bromodomain profile. 1169 1217 IPR001487 GO:0005515
Pvu4g0206 2204 PANTHER OS02G0192300 PROTEIN 31 2204 - -
Pvu4g0206 2204 Gene3D - 1120 1243 IPR036427 GO:0005515
Pvu4g0206 2204 ProSiteProfiles FYR domain FYRC motif profile. 608 686 IPR003889 GO:0005634
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 2164 2204 - -
Pvu4g0206 2204 ProSiteProfiles Zinc finger PHD-type profile. 1276 1326 IPR019787 -
Pvu4g0206 2204 SUPERFAMILY FYVE/PHD zinc finger 84 150 IPR011011 -
Pvu4g0206 2204 ProSiteProfiles Zinc finger PHD-type profile. 83 141 IPR019787 -
Pvu4g0206 2204 MobiDBLite consensus disorder prediction 1 29 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0206 28 2204 C2H2 Transcription Factor Family AT3G01460 44.256 0.0 1700
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pvu4g0206 Bromodomain 4.9e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0206 K22768 - gmx:100820223 3539.58