LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu4g0199	ATGAAGAAGAGTGAGAGTGGGGGGTATGTGAGAGCGGATCAGATAGATCTGAAGAGCTTGGATGAGCAGCTTCAGAGGCATCTGAGTAGAGCATGGACTATGGAGAAGAACAAGGAGAAGGAGGAAGAGGAGGTTGAAGGAAGGTCCACAAGAAGCAGACAAGAGTGGGAGATTGACCCCTCTAAGCTTGTCATCAAGACTGTCATTGCCCGTGGCACTTTTGGCACAGTTCATCGTGGGATTTATGATGGACAAGATGTTGCAGTTAAGCTCCTTGACTGGGGGGAAGAGGGTCATCGATCAGATGCTGAAATAGCTTCTTTGAGAGCAGCGTTTACTCAAGAAGTTGCCGTTTGGCACAAGCTTGACCATCCTAATGTAACCAGGTTTCTTGGGGCAACAATGGGAACATCAGAGCTACAGATACAAACAGAAAATGGTCATATAGGCATGCCAAGTAATGTTTGTTGTGTTGTTGTTGAATATTGTCCTGGAGGTGCACTGAAGACTTATCTTATTAAAAACCGAAGAAGGAAGCTGGCTTTTAAAGTGGTTGTTCAACTGGCTCTTGACCTTGCAAGAGGGTTGAGCTATCTCCACACAAAGAAGATTGTCCACAGAGATGTTAAAACAGAAAATATGCTTCTGGACAAGACACGAACCTTGAAAATAGCTGATTTTGGAGTGGCTCGTATTGAGGCTTCCAATCCTCATGACATGACAGGTGAAACTGGAACCCTTGGTTACATGGCTCCTGAGGTTCTAAATGGTAATCCATACAATAGAAAGTGTGACGTGTACAGTTTCGGCATATGCTTATGGGAGATATACTGCTGTGACATGCCATATCCGGACCTTAGCTTCTCCGAAGTGACATCAGCTGTAGTACGGCAGAATCTGAGGCCAGAGATTCCACGATGTTGTCCTAGCTCTCTGGCAAATGTGATGAAAAGATGCTGGGATGCCAATCCTGATAAGAGGCCAGAGATGGATGAAGTAGTGTCCATGATGGAAGCTATTGACACTTCAAAGGGTGGAGGTATGATCCCTGTTGATCAGCCTCAAGGTTGTTTATGTTTTCGCAGCTATCGAGGACCTTGA	1101	0.4532	MKKSESGGYVRADQIDLKSLDEQLQRHLSRAWTMEKNKEKEEEEVEGRSTRSRQEWEIDPSKLVIKTVIARGTFGTVHRGIYDGQDVAVKLLDWGEEGHRSDAEIASLRAAFTQEVAVWHKLDHPNVTRFLGATMGTSELQIQTENGHIGMPSNVCCVVVEYCPGGALKTYLIKNRRRKLAFKVVVQLALDLARGLSYLHTKKIVHRDVKTENMLLDKTRTLKIADFGVARIEASNPHDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDANPDKRPEMDEVVSMMEAIDTSKGGGMIPVDQPQGCLCFRSYRGP*	367

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu4g0199	366	CDD	STKc_MAP3K-like	69	337	-	-
Pvu4g0199	366	Coils	Coil	24	44	-	-
Pvu4g0199	366	SMART	serkin_6	63	340	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pvu4g0199	366	Gene3D	Transferase(Phosphotransferase) domain 1	163	349	-	-
Pvu4g0199	366	PRINTS	Tyrosine kinase catalytic domain signature	160	173	IPR001245	GO:0004672\|GO:0006468
Pvu4g0199	366	PRINTS	Tyrosine kinase catalytic domain signature	198	216	IPR001245	GO:0004672\|GO:0006468
Pvu4g0199	366	PRINTS	Tyrosine kinase catalytic domain signature	264	286	IPR001245	GO:0004672\|GO:0006468
Pvu4g0199	366	PRINTS	Tyrosine kinase catalytic domain signature	308	330	IPR001245	GO:0004672\|GO:0006468
Pvu4g0199	366	PANTHER	DUAL-SPECIFICITY KINASE TKL-PL-4 FAMILY-RELATED	1	360	-	-
Pvu4g0199	366	ProSiteProfiles	Protein kinase domain profile.	63	340	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu4g0199	Pvu-Chr4	1735048	1739932	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu4g0199	11	366	MAP Kinase Kinase Kinase	AT3G22750	70.000	0.0	544

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-4	Pvu4g0199		PK_Tyr_Ser-Thr	1.2e-63	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu4g0199	-		-	gmx:100796762	724.931

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