Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0184 TTCATTCCTGCACTGAATCCATTCACTTCATTTCCAACTCCTACCATTGTTGGTGGTGCTCTTCTTTCGGCCTTTCTTCAGGTTGCATTCGACAGGCTAGCTTCTCCTCAATTTCTACACTTCTTTCGTGGAAGAAAACTTGATGAGAAACTGCTCGGCAATTTGAACATCATGCTGCACTCCATCAATGCTCTAGCTGATGATGCTGAACTAAGGCAGTTCACAGATCCACACGTCAAAGCATGGCTTTTTGCTGTCAAAGAGGCTGTCTTTGATGCAGAGGATCTTTTGGGTGAAATAGACTATGAACTCACCAGATGCCAAGTCCAACCTCAATCCCAACCTCAAACCTTTACTTACAAGGTATCAAATTTCTTCAACTCTACTTTCACTTCATTTAACAAGAAAATTGAATCAGAGATGAAAGAAGTTATGGAGAAACTAGAATATCTTGTAAAGCAAAAGAGTGCTCTTGGTTTGAAAGAGGGTACTTATTCTGTTGATGGATCAGGTGGTAAAGTGCCATCATCTTCTTTGGTGGTTGAAAGTGTTATTTATGGTAGAGATGCTGACAAAGATATAATCATTAATTGGCTCACATCTGAAACAAATAATCCTAACCAGCCATCAATACTTTCCATTGTGGGTATGGGTGGTTTGGGTAAGACCACACTCGCCCAACATGTGTACAATGATCCAAAGATTGACGATGCAAAATTTGATATCAAAGCTTGGGTTTGTGTTTCTGATCATTTTCATGTTTTGACAGTGACAAAAACAATTCTTGAGGCAATCACTGGTATAAAAGATGATAGTGGGAACCTTGAAATGGTTCACAAAAAGCTGAAAGAAAAATTGTCAGGAAGGAAATTTCTTCTTGTTTTGGATGATGTGTGGAACGAAAGACCAATAGAATGGGAAGCTGTGCGAACTCCTCTTAGTTATGGGGCTTCAGAAAGTAGAATTCTCGTCACTACTCGTGGTGAGAAAGTTGCTTCTAGCATGAGGTCTGAAGTGCATCTTTTAAAGCTATTAGGAGAGGATGAATGCTGGAATATTTTTAAAAATAATGCATTAAAAGATGATGATCTTAAATTGAATGATGAGCTAAAGAACATTGGTAGAAGGATAGTTGAGAAATGCAACGGATTGCCTCTAGCTTTAAAAACAATTGGATGTCTTTTATGCACAAATGAAATTATCCCTGCGTTATTTTTGAGCTATCGCTATCTTCCTTCTCATCTTAAGAGGTGCTTTGTTTATTGTGCCTTGTTTCCTAAAGATTATACGTTTGTGAAGGAGGAGTTAATTTTGATGTGGATGGCCCAAAATTTTCTACAGAGTCCACAACAAATGAGACATCCAGAAGAAGTTGGTGAAGAGTACTTCAATGATCTACTATCAAGGTCTTTCTTTCAACAGTCAACCGTTGTTGGACGTTTCGTCATGCATGACCTTCTGAATGATTTGGCAAAATATGTCTGCGAGTGTATACCGAAAACAACTCGTCATTTTTCATTTGAATTCTGTGATGTCAAAAGTTTTGATAATTTTGGGAGTTTAACAGATGCTAAAAGGCTTCGTTCATTTCTTCCTATCTCACAATTTTGGGAACGTCAATGGCATTTCAAGATTTCCATACATGATTTGTTTTCCAAGATTAAGTTTATACGCATGTTATCTTTTTGTCGTTGTTCATTCCTTAGAGAGGTCCCAGATTCTGTAGGTGATCTTAAACATCTCCATTCACTAGATCTTTCATGGTGTACTGCGATACAAAAGTTACCTGACTCGATATGTTTGCTCTATAACTTACTAATATTGAAGTTGAACTATTGTTCAAAGCTGAAAGGTTTCGAAATTTGGTCATGTCCACTTGTGAGTATTCCCATGACCCATTACGATTTCCTTGAAGAAATGTGTATTGTTGGTGGCTGCGACTCTCTTAGAATCTTTCGGCTAGATTTCTTTCCAAAGCTTCGCCTTCTTCAACTAAGAAGCTGCCAAAACCTAAGAAGAATGTCACAGGAGTACGCTCATAATCATCTCATGTATCTATATATTAATGATTGCCCTCAATTTGAATCATTCCTGGGTGAAGGGTTATCTGCAACATTAATAGGAAATGAGAATTTGAAGTTGTTACCGAAACCCATGCAAATCCTGTTGCCGTCCCTTACCAGGCTCCATATGATTGATTGTCCAAAAGTGGAGATGTTCCCAGATGGAGGGTTGCCATTAAAAGTAAAAGATTTGTCTCTTTCAAGTTTAAAACTTATCGCCTCCCTGAGACAGACCTTGGATCCCAACACATGTCTTGAAAGCTTGTCTATTGAAAAGTTGGACGTGGAGTGTTTTCCCGATGAAGTTTTGCTGCCAAGCTCTCTCACCTTTCTAAAAATCTATTTTTGTCGAAATCTTAAAAAGATGCACTTCAAGGGTCTCTGCCACCTCTCCTCTCTCTCACTTCAACATTGCCACAACCTCCAATGCTTACCAGAGGAGGGTCTGCCCAAATCCATCTCTTCTCTCTCAATCTGGCGTTGTTCATTGCTGAAGAAGCGTTGTCAGAATCCAGATGGCGAAGACTGGGGAAAGATTGCTCACATCCAAGAACTGGAACTAGATGTTTGA 2634 0.3895 FIPALNPFTSFPTPTIVGGALLSAFLQVAFDRLASPQFLHFFRGRKLDEKLLGNLNIMLHSINALADDAELRQFTDPHVKAWLFAVKEAVFDAEDLLGEIDYELTRCQVQPQSQPQTFTYKVSNFFNSTFTSFNKKIESEMKEVMEKLEYLVKQKSALGLKEGTYSVDGSGGKVPSSSLVVESVIYGRDADKDIIINWLTSETNNPNQPSILSIVGMGGLGKTTLAQHVYNDPKIDDAKFDIKAWVCVSDHFHVLTVTKTILEAITGIKDDSGNLEMVHKKLKEKLSGRKFLLVLDDVWNERPIEWEAVRTPLSYGASESRILVTTRGEKVASSMRSEVHLLKLLGEDECWNIFKNNALKDDDLKLNDELKNIGRRIVEKCNGLPLALKTIGCLLCTNEIIPALFLSYRYLPSHLKRCFVYCALFPKDYTFVKEELILMWMAQNFLQSPQQMRHPEEVGEEYFNDLLSRSFFQQSTVVGRFVMHDLLNDLAKYVCECIPKTTRHFSFEFCDVKSFDNFGSLTDAKRLRSFLPISQFWERQWHFKISIHDLFSKIKFIRMLSFCRCSFLREVPDSVGDLKHLHSLDLSWCTAIQKLPDSICLLYNLLILKLNYCSKLKGFEIWSCPLVSIPMTHYDFLEEMCIVGGCDSLRIFRLDFFPKLRLLQLRSCQNLRRMSQEYAHNHLMYLYINDCPQFESFLGEGLSATLIGNENLKLLPKPMQILLPSLTRLHMIDCPKVEMFPDGGLPLKVKDLSLSSLKLIASLRQTLDPNTCLESLSIEKLDVECFPDEVLLPSSLTFLKIYFCRNLKKMHFKGLCHLSSLSLQHCHNLQCLPEEGLPKSISSLSIWRCSLLKKRCQNPDGEDWGKIAHIQELELDV* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0184 877 Pfam Rx N-terminal domain 22 114 IPR041118 -
Pvu4g0184 877 PRINTS Disease resistance protein signature 211 226 - -
Pvu4g0184 877 PRINTS Disease resistance protein signature 285 299 - -
Pvu4g0184 877 PRINTS Disease resistance protein signature 381 395 - -
Pvu4g0184 877 PRINTS Disease resistance protein signature 576 592 - -
Pvu4g0184 877 PANTHER OS05G0414200 PROTEIN 24 820 - -
Pvu4g0184 877 Gene3D - 345 405 IPR042197 -
Pvu4g0184 877 Gene3D - 46 157 - -
Pvu4g0184 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 422 IPR027417 -
Pvu4g0184 877 Coils Coil 134 154 - -
Pvu4g0184 877 Gene3D Ribonuclease Inhibitor 491 617 IPR032675 -
Pvu4g0184 877 Gene3D - 406 490 IPR036388 -
Pvu4g0184 877 Gene3D - 171 344 IPR027417 -
Pvu4g0184 877 SUPERFAMILY L domain-like 478 868 - -
Pvu4g0184 877 PANTHER DISEASE RESISTANCE PROTEIN RP 24 820 IPR044974 GO:0006952
Pvu4g0184 877 Gene3D Ribonuclease Inhibitor 618 860 IPR032675 -
Pvu4g0184 877 Pfam NB-ARC domain 189 401 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0184 Pvu-Chr4 1582975 1585771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0184 212 513 WRKY Transcription Factor Family AT5G45050 25.000 7.23e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0184 - - pvu:PHAVU_004G015700g 1723.75