Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0164 ATGGCAACTACTCCAAGCATTCCATCACACATAAAAGCTTGGGTTTATTCTGAATATGGAAACACAGAAGACATTCTCAAATTTGAATCAAACATACCTATACCACAGATCAAGGAAGACCATGTGCTCATCAAGGTTGTGGCTGCAGCCCTTAATCCTATAGATTATAAGAGGGCTCTTGGCTTTTTCAAGAACACTGACTCTCCCTTGCCTACTGTTCCGGGGTATGATGTTGCTGGTGTGGTGGTGAGTGTGGGAAGTCAAGTGAGAAAGTTCAAGGTTGGGGATGAGGTTTATGGTGATATCAATGAGGATCCTCTGGACAATCCAAAAACTGTTGGATCTTTGGCAGAGTATACTGCTGTTGAAGAAAAGTTATTGGCTCACAAACCTTCCAATTTGAGCTTTGTTGAAGCTGCTTCCCTTCCTTTAGCCATCATCACTGCTTATCAAGGACTAGAAAGAGTTGAGTTTTCTGCTGGCCAATCTGTACTTGTTCTTGGAGGTGCTGGTGGAGTTGGATCCCTTGTTATTCAGCTCGCCAAACACGTTTTTGGGGCATCAAAGGTTGCAGCCACAGCCAGTACTGGGAAACTGGATTTGTTGAGGAACTTGGGAGCAGACTTAGCCATTGATTATACAAAGGAGAAGTTTGAAGAGCTGGAAGAAAAGTTTGATGTAGTGTACGATACAGTAGGGCGGGGTGAGATTGAGAGAGCATCGAAGGCAGTTAAAGAAAGTGGGAAAGTTGTGACAGTAGCAGCAATTGGAACTTCAGCTATCTTTGTAAAACGCATTTCAGATGGTGGTGTGTTGGAGAAACTACAACCTTACTTAGAGAGTGGGAAGGTGAAGCCAATACTTGACCCTAAGAGTCCCTTTTTGTTTTCTCAGACTGTGGAGGCATTTGCACACTTGAAGACTAATAGAGCCATTGGAAAAGTGGTCATACACCCCATTCCATGA 966 0.4358 MATTPSIPSHIKAWVYSEYGNTEDILKFESNIPIPQIKEDHVLIKVVAAALNPIDYKRALGFFKNTDSPLPTVPGYDVAGVVVSVGSQVRKFKVGDEVYGDINEDPLDNPKTVGSLAEYTAVEEKLLAHKPSNLSFVEAASLPLAIITAYQGLERVEFSAGQSVLVLGGAGGVGSLVIQLAKHVFGASKVAATASTGKLDLLRNLGADLAIDYTKEKFEELEEKFDVVYDTVGRGEIERASKAVKESGKVVTVAAIGTSAIFVKRISDGGVLEKLQPYLESGKVKPILDPKSPFLFSQTVEAFAHLKTNRAIGKVVIHPIP* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0164 321 Gene3D - 18 317 - -
Pvu4g0164 321 CDD MDR_like_2 12 317 - -
Pvu4g0164 321 Pfam Zinc-binding dehydrogenase 205 317 - -
Pvu4g0164 321 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 1 321 IPR044626 GO:0016628
Pvu4g0164 321 Gene3D - 153 268 - -
Pvu4g0164 321 PANTHER 2-METHYLENE-FURAN-3-ONE REDUCTASE-RELATED 1 321 - -
Pvu4g0164 321 SUPERFAMILY GroES-like 8 166 IPR011032 -
Pvu4g0164 321 SMART PKS_ER_names_mod 21 317 IPR020843 GO:0016491
Pvu4g0164 321 Pfam Alcohol dehydrogenase GroES-like domain 40 101 IPR013154 -
Pvu4g0164 321 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 134 262 IPR036291 -
Pvu4g0164 321 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 161 182 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0164 Pvu-Chr4 1483531 1485907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0164 64 231 Monolignol Biosynthesis Gene Families AT1G72680 28.571 4.96e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0164 K18980 - gmx:100793908 514.998