Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0149 CTTAGTTCTTTAGTGATCTTCTTCTTAACCACTAATTCTGTGTTGAATCAAGCCTTCAGAAGAGATGGTAAGGTGGTTGATTTTGAAATACTTGGAGTCACAATGTATACATGTGTGGTCTGGACTGTGAATTGCCAAATGGCACTATCCATCAATTACTTTACTTGGATACAACATTTTTTTATATGGGGCAGCATTGCCTTCTGGTATGTGTTTGTGTTGGTCTATGGTTACCTCTCCCCAGCAATATCCACAACAGCTTACAGGGTTTTTGTGGAAGCATGTGCTCCCAGTGGTCTATATTGGCTAGTAACCCTTTTGGTTGTTGTGTGTGTGCTGCTACCCTATTTCTCCTATAGGTCTTTCCAAAGTCGGTTTCTACCAATGTACCATGATATTATACAGAGAGAACAAGTAGAAGGGATTGAAATTGGGTTATCAGATGATGAGTTACCTAAAAAGGTCCAGGGAAAACTAATACACCTCAGAGAAAGATTGAAGCAAAGGGAGATGTGA 516 0.3992 LSSLVIFFLTTNSVLNQAFRRDGKVVDFEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIAFWYVFVLVYGYLSPAISTTAYRVFVEACAPSGLYWLVTLLVVVCVLLPYFSYRSFQSRFLPMYHDIIQREQVEGIEIGLSDDELPKKVQGKLIHLRERLKQREM* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0149 171 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 2 141 - -
Pvu4g0149 171 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 141 - -
Pvu4g0149 171 SUPERFAMILY Calcium ATPase, transmembrane domain M 22 127 IPR023298 -
Pvu4g0149 171 Pfam Phospholipid-translocating P-type ATPase C-terminal 2 128 IPR032630 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0149 Pvu-Chr4 1313709 1314484 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0149 1 170 Primary Pumps ATPases AT3G27870 59.538 9.11e-67 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0149 K01530 - pvu:PHAVU_004G0127000 333.183