Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0147 ATGGAGCATGTTTTGGAAAAAAGATTCCCTCTTAATGCAGAAGATTACAAGTTATATGAAGAAGTTGGTGAAGGCGTTAGTGCCTCTGTATACAGGGCTCTTTGTGTTCCTCTCAACGAGATAGTTGCAATCAAGGTTCTCGATCTAGAGAAGTGCAATAATGATCTGGATGGCATTCGAAGAGAGGTACAGACCATGAGCTTGATTGATCATCCAAATCTTTTACAGGCACATTGCTCTTTTACTGCTGGACACAATCTATGGGTTGTAATGCCATACATGGCAGGGGGTTCTTGCCTTCATATAATGAAGTCTGCCTATCCTGAGGGGTTTGAAGAGCCTGTTATTGCTACTTTATTGCATGAAGTTCTCAAAGCTCTTGTTTATCTTCATGCCCATGGTCACATACATAGAGATGTTAAGGCTGGGAATATTCTGTTAGATTCTAATGGTGCAGTCAAACTGGCTGACTTTGGAGTGTCAGCATGTATGTTTGATACTGGAGACAGGCAACGTTCAAGAAACACTTTTGTTGGAACACCTTGCTGGATGGCTCCCGAAGTCATGCAGCAATTACATGGATATGATTTTAAAGCAGATATATGGTCATTTGGTATAACAGCACTTGAACTTGCTCATGGTCATGCCCCGTTTTCCAAGTATCCACCTATGAAAGTTTTGCTTATGACTTTACAGAATGCCCCTCCAGGTCTTGATTATGAAAGAGATAAGAGATTTTCAAAGGCTTTCAAGGAGTTGGTTGCCACCTGCTTAGTAAAAGACCCAAAAAAGCGTCCTAGTTCAGAAAAGCTATTAAAGCACCACTTCTTTAGACATGCACGTGCTAGCAAATATCTATCTCGCACCATTCTAGAGGGCCTTGCTCCTTTAGGAGATCGTTTTAGAACGCTGAAGGCTAAAGAGGCAGATTTATTGGTGCAGAACAAGGCTCTTTATGAGGATAAGGATCAGTTATCTCAGAAAGAATATATTCGAGGAATCAGTGCCTGGAATTTTAACCTGGAAGATTTAAAAAGTCAAGCTGCTCTTATTCAAGATGATGACATACCTAATGAAGATGAGCCACAAAAGGATAAGAAGCAAAGAGACAGATTGGATGACTTCAGGGATCCTGCAGAGAGGTTATCATCTGTAACAGCTAATCATTCAGATGGTGCACCCACTCAGAACAAGGAGGATGGATTCAATAATATTCAGGATTTGGAGGGATCGCTTGCTTCATTTCCTAGTAAACCTCTTCAAGCACTTAAAGGATGTTTTGATATGTGTGAGGATGACGTTAATAACAACAGTCCAAGAGATCTGGATCATGATTATGGAAATGAAAGTTCTGGGCCAAGTTCTTCATTACAACAAAACGCCAACAATCAGCAAAAAAGGTTTTTGAGTGGTTCTTTGCTACCTGATAATTTTCTTTTTCCCAAAAAGGTTGCTACTGATGGGGACAGGGATTACCTACAAACAAAGTATTCTTCGGAGAGGAATCACAGTGGTCCATTGCAATATCGACAGAAGAGAGATACCAACAACCTTCCATTGGTTGATGACACATCAGATGGAGCATTTGTCCAGCGTAGGGGGCGGTTTAAGGTCACATCGGCTGATCTCAGTCCAATGGGTCCTTCAAACAGTGCTACTGGTCCAGTTGTTAGTCCTACCAGTCCACCAAATCAAAATTTCATGGCTGGCACCATTCTTCCATCACTGCAGTGCATCTTGCAACAGAATGGTTTGCAGAGGGAAGAGATTATAAAATTAATAAAGTATGCAGAGCAATCTTCTGGTAAGAATGCAGAATCAGTGGAGGCAGGGGCAGTTGATAGTTTGCAGGTACCTGCAACAACCAGGGAGAGGGATCTGCATTTTCAGGTGATTCAACTCCAACAGAGCATTGGAAGCCTTGTTGAGGAATTACAAAGACAAAAGATGAAAAATGTTCAGTTAGAGAAACAGTTGAGCAGTATCAATAACAAAGTGGAGAAGTGA 2007 0.4136 MEHVLEKRFPLNAEDYKLYEEVGEGVSASVYRALCVPLNEIVAIKVLDLEKCNNDLDGIRREVQTMSLIDHPNLLQAHCSFTAGHNLWVVMPYMAGGSCLHIMKSAYPEGFEEPVIATLLHEVLKALVYLHAHGHIHRDVKAGNILLDSNGAVKLADFGVSACMFDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKAFKELVATCLVKDPKKRPSSEKLLKHHFFRHARASKYLSRTILEGLAPLGDRFRTLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDDIPNEDEPQKDKKQRDRLDDFRDPAERLSSVTANHSDGAPTQNKEDGFNNIQDLEGSLASFPSKPLQALKGCFDMCEDDVNNNSPRDLDHDYGNESSGPSSSLQQNANNQQKRFLSGSLLPDNFLFPKKVATDGDRDYLQTKYSSERNHSGPLQYRQKRDTNNLPLVDDTSDGAFVQRRGRFKVTSADLSPMGPSNSATGPVVSPTSPPNQNFMAGTILPSLQCILQQNGLQREEIIKLIKYAEQSSGKNAESVEAGAVDSLQVPATTRERDLHFQVIQLQQSIGSLVEELQRQKMKNVQLEKQLSSINNKVEK* 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0147 668 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 1 665 - -
Pvu4g0147 668 Pfam Protein kinase domain 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0147 668 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Pvu4g0147 668 MobiDBLite consensus disorder prediction 357 380 - -
Pvu4g0147 668 ProSiteProfiles Protein kinase domain profile. 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0147 668 SUPERFAMILY Protein kinase-like (PK-like) 13 278 IPR011009 -
Pvu4g0147 668 MobiDBLite consensus disorder prediction 383 403 - -
Pvu4g0147 668 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 1 665 - -
Pvu4g0147 668 MobiDBLite consensus disorder prediction 448 463 - -
Pvu4g0147 668 MobiDBLite consensus disorder prediction 437 463 - -
Pvu4g0147 668 SMART serkin_6 16 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0147 668 MobiDBLite consensus disorder prediction 543 561 - -
Pvu4g0147 668 Gene3D Transferase(Phosphotransferase) domain 1 97 320 - -
Pvu4g0147 668 MobiDBLite consensus disorder prediction 540 561 - -
Pvu4g0147 668 CDD STKc_OSR1_SPAK 14 277 - -
Pvu4g0147 668 MobiDBLite consensus disorder prediction 350 403 - -
Pvu4g0147 668 Gene3D Phosphorylase Kinase; domain 1 5 92 - -
Pvu4g0147 668 Coils Coil 638 668 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0147 Pvu-Chr4 1274825 1287233 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0147 1 665 MAP Kinase Kinase Kinase Kinase AT5G14720 66.230 0.0 914
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Pvu4g0147 Pkinase 1.5e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0147 K08835 - gmx:100784402 1211.05