Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0130 ATGGCTTTCAAATGTCAGAGCAACAACTACAAGTACAAGTGCAAGAAATCATCTTTTGAGGTTGTGATCATCACAGTGGCCACCCTCTTGTGTTTCTCCCACTCAGCACTATCTGATCCAAGAATCTCTGAAGTGGGGTTCTTCTGTGGCACTCAAAAGGCATCACCAAGTGGTAACTACTTCCCCATTTTCACCAAAGAAATGGAAAAGCTTCATGAGCTTGTGAAGAAAAACAACTGGGGCACTCACTCTGAGGGACTTTCTTCAGCCACTCCCATCTATGCTTTGGTACAGTGCTTCCAAGACCTCTCCAACCTTGATTGCCTTCAGTGCTTTGCAACCAGCCGCACCAAGCTACCTCGCTGCCTCCCTTCAGTTTCTGCTCACATTTACCTTGATGGCTGCTTCCTTCGCTATGACAACTACAGTTTCTACTCTGAGGACACTGACCCTTTGAGGGACACAGTGAACTGCACCACAGAGTATGGTGGTGTGGCTGGTGAGGCTGAGAGGTTGGTGTTTGGCAATAGTGTTGGGAAAGTGGTTGAGAATGTGGTGAGGGTGGCAGGGAATGAGGGAAGAGGGTTTGCAGTGGGAGAAGGTGAGGGAGTTTATGCCTTGGCACAGTGCTGGAAAACTGTTGGGGGAAAAGGGTGTAGAGATTGCTTGAAGAAAGCTGAAAATGAGATTAGAGGGTGTTTGCCTAAGAAGGAAGGGAGGGCCTTGAATTCTGGCTGTTATTTGAGATATTCTAGTGATAAGTTCTACAATCAAGGAGGTGAAGATGGGGAAGGAGATGATTCTTCTAGAAAACGAATTATCATTACAGCAGTGTCTGTTTTGGCTGCAGCTGTTGTAGTTCTCTCTCTCTTGGTCACTTATGTGGCCTTCACCAAAAAGAGAAAAAACAACAATTTCATTGAGATTCCCTCTTCTTTGAAGAACTCTAGCTTGAATTACAAGTATGAAATTCTTGAGAAGGCCACAGATTATTTCAGCTCTCCAAGAAAATTAGGCCAAGGAGGAGCTGGTTCTGTATTCAAAGGGACTCTCCCCAATGGGAAAGATGTTGCTGTGAAGAGATTGGTCTTCAATAATAGGCAATGGGTGGATGATTTCTTCAATGAAGTGAATTTAATCAGTGGAATAAATCACAAAAACCTTGTCAAGCTTTTGGGTTGCAGTATTGAAGGCCCTGAGAGCCTCATTGTGTATGAGTACCTACCTAACAAGAGCTTAGACCATTTCCTTTTTGAAAAGGACAAAACAAGGATTCTAAAATGGAAGCAAAGGTTTGAAATAGTTGTTGGAATTGCAGAAGGGCTTGCATATCTTCATGGAGGCTCTGAAATAAGAATCATCCATAGAGACATCAAAAGTAGCAATGTTCTTCTTGATGAGAATCTCAACCCCAAGATTGCAGATTTTGGTCTTGCCAGGTGTTTTGGTGCTGATAAAACACATCTAAGCACAGGAATTGCTGGAACACTAGGTTACATGGCTCCAGAGTATCTCATTCAAGGACAACTTACAGATAAAGCAGATGTGTATAGTTTTGGAGTACTTGTTCTGGAGACTGCAAGTGGCAGGAAGAATAATGTCTTCCGTGAGGATTCTGATTCCCTTTTGCAAACAGTTTGGAAACTTTACCAATCAAACAGATTGGGTGAAGCTGTTGATCCATGCTTGGGAAATGAGTTTCCTGCAAGAGAAGCATCAAGGGTGTTTCAAATTGGACTACTGTGCACACAAGCTTCTGCTTCCCTTAGGCCATCCATGGCCCAAGTTGCTTGCATGTTAAGCAATTCAGATTTGGATGTCCCTATACCAAAACAACCCCCATTTTTGAACTCTAGATTGCTGAATCAAACACCTCCATTAGGTTTTAGCACAGATAACTCCTCATCAAACACATTTAAAAAGATTGGTGTTTCCTACAGCCCCACTCAGTCCTCTAGTTCATGCAGCTTAATTAGATCATCCAAAACTGAGGAAACAATTTTGGAAGTTTGA 2013 0.4292 MAFKCQSNNYKYKCKKSSFEVVIITVATLLCFSHSALSDPRISEVGFFCGTQKASPSGNYFPIFTKEMEKLHELVKKNNWGTHSEGLSSATPIYALVQCFQDLSNLDCLQCFATSRTKLPRCLPSVSAHIYLDGCFLRYDNYSFYSEDTDPLRDTVNCTTEYGGVAGEAERLVFGNSVGKVVENVVRVAGNEGRGFAVGEGEGVYALAQCWKTVGGKGCRDCLKKAENEIRGCLPKKEGRALNSGCYLRYSSDKFYNQGGEDGEGDDSSRKRIIITAVSVLAAAVVVLSLLVTYVAFTKKRKNNNFIEIPSSLKNSSLNYKYEILEKATDYFSSPRKLGQGGAGSVFKGTLPNGKDVAVKRLVFNNRQWVDDFFNEVNLISGINHKNLVKLLGCSIEGPESLIVYEYLPNKSLDHFLFEKDKTRILKWKQRFEIVVGIAEGLAYLHGGSEIRIIHRDIKSSNVLLDENLNPKIADFGLARCFGADKTHLSTGIAGTLGYMAPEYLIQGQLTDKADVYSFGVLVLETASGRKNNVFREDSDSLLQTVWKLYQSNRLGEAVDPCLGNEFPAREASRVFQIGLLCTQASASLRPSMAQVACMLSNSDLDVPIPKQPPFLNSRLLNQTPPLGFSTDNSSSNTFKKIGVSYSPTQSSSSCSLIRSSKTEETILEV* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0130 670 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 32 657 - -
Pvu4g0130 670 SUPERFAMILY Protein kinase-like (PK-like) 317 620 IPR011009 -
Pvu4g0130 670 Gene3D Transferase(Phosphotransferase) domain 1 408 607 - -
Pvu4g0130 670 CDD STKc_IRAK 338 600 - -
Pvu4g0130 670 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Pvu4g0130 670 SMART serkin_6 332 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu4g0130 670 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 32 657 - -
Pvu4g0130 670 ProSiteProfiles Gnk2-homologous domain profile. 153 255 IPR002902 -
Pvu4g0130 670 Pfam Protein tyrosine and serine/threonine kinase 336 597 IPR001245 GO:0004672|GO:0006468
Pvu4g0130 670 Pfam Salt stress response/antifungal 174 252 IPR002902 -
Pvu4g0130 670 Pfam Salt stress response/antifungal 55 142 IPR002902 -
Pvu4g0130 670 Gene3D - 44 144 IPR038408 -
Pvu4g0130 670 Gene3D - 169 255 IPR038408 -
Pvu4g0130 670 ProSiteProfiles Gnk2-homologous domain profile. 42 144 IPR002902 -
Pvu4g0130 670 Gene3D Phosphorylase Kinase; domain 1 293 407 - -
Pvu4g0130 670 ProSiteProfiles Protein kinase domain profile. 332 616 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0130 Pvu-Chr4 1084516 1089721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0130 15 497 Receptor kinase-like Gene Family AT5G40380 53.939 2.69e-178 514
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu4g0130 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0130 - - gmx:100819689 1092.41