Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0123 TGTGTTAAGGCTGGTATTCCTTTCTTTCCTTCAAATGTAACAGTTCGTATAACCAATCGCTTTGACATGAGATATTTGGCTGTTCAGTGTAAAGACAAACACAATGATCTTGGGGTGCAGCAACTGAATGTTGGCCAAACATTTAGTTTTTCGTTTCTTCCAGATATTTTTTTCCCTGAAACCTTATACTTTTGTCATTTTGTATGGTTGGAAGGAGATCATTATTTTGACATATATGTCGAAAAGCGAGATACTTACTGTAAAGGAGATTCATGTTCTTGGGACATATTTGCGAATGGACCATGCAGAATGATATCGGGACATCGACAATGCTTTGGTTGGAATCCACCTGTCGTAGAAGAAAGGTTGCCTCTGCAACAAAGTAATAACACTTTATATGTATAA 405 0.3704 CVKAGIPFFPSNVTVRITNRFDMRYLAVQCKDKHNDLGVQQLNVGQTFSFSFLPDIFFPETLYFCHFVWLEGDHYFDIYVEKRDTYCKGDSCSWDIFANGPCRMISGHRQCFGWNPPVVEERLPLQQSNNTLYV* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0123 134 Pfam Plant self-incompatibility protein S1 14 106 IPR010264 -
Pvu4g0123 134 PANTHER S-PROTEIN HOMOLOG 18-RELATED 8 114 - -
Pvu4g0123 134 PANTHER - 8 114 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0123 Pvu-Chr4 1010279 1010683 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0123 26 115 Carbohydrate Esterase AT3G16970 37.755 3.04e-15 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0123 - - pvu:PHAVU_004G010300g 296.589