Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0122 ACAGTTAGTATAACCAATCGCTTAGACATGAGATATTTGGCTGTTCAGTGTAAAGACAAACACAATGATCTTGGGGTGCAACAACTGAATGTTGGCGAAACATTTAGTTTTAGGTTCCTTCCAGATATTTTTTTCCCTGAAACCTTGTACTTTTGTCATTTTGTATGGTTGGAAGGAGATCATTATTTTGACATATATGTCGAAAAGCGAGATTCTTATTGTATAGAAGATTCATGTTCTTGGGACATATTTGCGAATGGACCATGCAGAATAATATCGGGACATCGAGAGTGCTATGGTTGGAATCCACCTGTCGTAGGAGAAAGATTGTCTTTGCAACAAAGTAATAACACTTTATATGTATAA 366 0.3607 TVSITNRLDMRYLAVQCKDKHNDLGVQQLNVGETFSFRFLPDIFFPETLYFCHFVWLEGDHYFDIYVEKRDSYCIEDSCSWDIFANGPCRIISGHRECYGWNPPVVGERLSLQQSNNTLYV* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0122 121 PANTHER S-PROTEIN HOMOLOG 18-RELATED 1 101 - -
Pvu4g0122 121 PANTHER - 1 101 IPR010264 -
Pvu4g0122 121 Pfam Plant self-incompatibility protein S1 1 101 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0122 Pvu-Chr4 1006379 1006744 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0122 1 91 Carbohydrate Esterase AT3G16970 41.053 7.61e-16 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0122 - - pvu:PHAVU_004G010300g 243.817