Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0106 ATGAATCTTGACGGAGAAACTAATCTGAAATTAAAGCATGCTTTGGAGGTGACAACTCATCTTCATGATGAAAAATCTCTCCAAAAGTTCAGGGCTGATGTTGATGGTGGATCCTCTGATTTCTTGGGCCAGACTATTCCAGATGAAGATAATGAATCTGGAGAAATTTCCTATGAAGCCGAATCACCAGATGAAGCAGCTTTTGTCATAGCTGCAAGGGAGCTTGGTTTTGAGTTTTTTGCAAGGACACAATCAAGCATATCATTGCACGAATTGCATTATGAAAGTGGAAAAAAGGTTGACAGAGTGTATCAGCTTCTACATGTGTTAGAGTTCAGCAGTTCCCGCAAAAGAACGTCAGTGATAACAGTTTATGGGTCACATACCGTGAACTTGATGAAGAAGAATATAACTTATGGGACAAGGAGTTTTCAATGGTCAAAAACTTCTGTAACAGAAGACCGAGATGCACTGGTGGATGCAGCTGCTCACAAGATGGAAAGAGATTTGATATTTCTTGGTGTTACTGCAGTTGAGGATAGACTGCAAAAAGGGAATTTGGAAAAGTCCTTCTTTGAGCTTGCCATTAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAAAAAGCTCGTGTTACAAGGTTGGTAAAATTGGGAACTGGGAAGACAACATTATGTATTGGTGATGGGGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTATCATGGCAACTGATTTTGCAATAGCTCAATTCCGGTTTCTGGAGCGTTTGTTGTTGGTACATGGCCATTGGTCTTTCGAAAGTGGGTTTGTACCAATGGACCATGATATTATACAGAGAGAATAA 894 0.4105 MNLDGETNLKLKHALEVTTHLHDEKSLQKFRADVDGGSSDFLGQTIPDEDNESGEISYEAESPDEAAFVIAARELGFEFFARTQSSISLHELHYESGKKVDRVYQLLHVLEFSSSRKRTSVITVYGSHTVNLMKKNITYGTRSFQWSKTSVTEDRDALVDAAAHKMERDLIFLGVTAVEDRLQKGNLEKSFFELAINCASVICCRSSPKQKARVTRLVKLGTGKTTLCIGDGANDVGMLQEADIGVGISGAEGMQAIMATDFAIAQFRFLERLLLVHGHWSFESGFVPMDHDIIQRE* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0106 297 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 56 134 IPR023299 GO:0000166
Pvu4g0106 297 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 138 185 - -
Pvu4g0106 297 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 34 - -
Pvu4g0106 297 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 187 282 - -
Pvu4g0106 297 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 45 124 - -
Pvu4g0106 297 Gene3D - 132 269 IPR023214 -
Pvu4g0106 297 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 197 283 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu4g0106 297 Pfam Phospholipid-translocating P-type ATPase C-terminal 258 282 IPR032630 -
Pvu4g0106 297 SUPERFAMILY HAD-like 169 281 IPR036412 -
Pvu4g0106 297 Gene3D - 43 131 IPR023299 GO:0000166
Pvu4g0106 297 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 187 282 - -
Pvu4g0106 297 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 45 124 - -
Pvu4g0106 297 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 1 34 - -
Pvu4g0106 297 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 138 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0106 Pvu-Chr4 906782 909895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0106 1 31 Primary Pumps ATPases AT3G27870 70.968 2.65e-06 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0106 K01530 - pvu:PHAVU_004G009600g 589.341