Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0089 GCTTCTCTTGAAAGCATTAAGAAGCAAATTGGAGAAGGAATCTCACAAATTAACTCTGCCAAAGAGAGTTCTAATGCAAATAAAGGAACGTCTTCTGGGTTTGGCTTGATAATCGATGGAAAGTCCTTGGATTATTCTCTTAACAAGAATTTGGAGAAGTCCTTCTTTGAGCTTGCCATTAATTGTGCTTCTGTCATATGTTGCCGATCTTCACCCAAACAAAAAGCTCGTGTTACAAGGTTGGTAAAATTGGGAACTGGGAAGACAACATTATCTATTGGTGATGGGGCAAATGATGTTGGCATGCTTCAGGAGGCTGATATTGGAGTTGGCATTAGTGGTGCTGAAGGGATGCAGGCTATAATGGCAAGTGATTTTGCAATAGCTCAATTCCGGTTTCTGGAGCGTTTGTTGTTGGTACATGGCCATTGGTGTTATCGGCGTATATCAATGATGATATGCTATTTTTTCTATAAAAACATTGCGTTTGGATTTACCCTTTTTTGGTTTGAGGCATATGCTTCTTTCTCTGGTCAAGCTGCTTACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCAGTAATCGCTCTAGGTGTTTTTGATCAGGATGTTTCTGCCAAACTTTGTCTAAAGTATCCTGTTCTATATCTAGAGGGAGTAGAAGACACCCTCTTCAGCTGGCCCCGGATTCTTGGGTGGATGTTGAATGGAGTACTTAGTTCTTTAGTGATCTTCTTCTTAACCACTAATTCTGTGTTGAATGAAGCCTTGAGAAGAGATGGTAAGGTGGTTGATTTTGAAATACTTGGGTCACAATGTATGCATGTGTGGTGTGGACTGTGA 858 0.4021 ASLESIKKQIGEGISQINSAKESSNANKGTSSGFGLIIDGKSLDYSLNKNLEKSFFELAINCASVICCRSSPKQKARVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAIMASDFAIAQFRFLERLLLVHGHWCYRRISMMICYFFYKNIAFGFTLFWFEAYASFSGQAAYNDWYMSFYNVFFTSLPVIALGVFDQDVSAKLCLKYPVLYLEGVEDTLFSWPRILGWMLNGVLSSLVIFFLTTNSVLNEALRRDGKVVDFEILGSQCMHVWCGL* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0089 285 Pfam Phospholipid-translocating P-type ATPase C-terminal 122 278 IPR032630 -
Pvu4g0089 285 Gene3D - 1 133 IPR023214 -
Pvu4g0089 285 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 2 277 - -
Pvu4g0089 285 SUPERFAMILY Calcium ATPase, transmembrane domain M 142 253 IPR023298 -
Pvu4g0089 285 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 9-RELATED 2 277 - -
Pvu4g0089 285 SUPERFAMILY HAD-like 36 141 IPR036412 -
Pvu4g0089 285 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 61 176 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0089 Pvu-Chr4 765416 768033 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0089 1 275 Primary Pumps ATPases AT3G27870 77.455 1.20e-154 455
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0089 K01530 - pvu:PHAVU_004G0086001 575.859