Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0064 ATGGCAAAAGAGGTTGTTGAAAGCCTTTGGAATGGTGGTGAAGAATCTCAAATTCAAGCAGCTTTGGAGCTTTGTAGATTCAGCAGTAGGCAGAGGCAAAAGCTGGAGGAAAGTAGAGTCATGGTTCCTCTTGTTTCCATGCTTCATTCTGAAAACTATGAAGCAATAGAAGCTGCTCTCTGTGCTTTGCTCAGTCTTTCCTTTGGCTGTGAGAGAAACAAGATTCGGATCATCAAATCTGGAGCTTTGCCAGTTCTGCTGAGTCTCCTCCATGGTGATAGCCAGAGAGTGGCACAGTTGACTTTGGCAGCCATGCTAACTCTCTCCTCTTGCAAAGCAAATAAGGTAGCAATTGCTTCTTCTGGGGCTGTTCAACTCTTGGCTGAGTTTGTGAACAGCAATTGTAGCACTCAGTCTCAGCTTGATGCTATTGCTACTCTACACAATCTTGCAACCTGCCAAGAGATTGTTCCATTGATTGTCTCTTCTGGGGTTATGCTCTCTTTGCTTGAACTGATCCATACCTCAGTAAAATCAACTCCATTGGTTGAGAAAGCAATTGGGTTGCTAGAAAACCTCATGTCTTCATCAGAGAGTGCACTATGTGAGGCTGCTAGTACTATGGGAGCAATCAGGATACTGGTTGAGACTGTTGAAGATGGTTCTTCACTGAGCAAAGAGCATGCAGTGTGCATACTTCTCCTTGTATGCCAGAGCTGCAGAGAGAAGTATAGAGGGTTGATTTTGACAGAGGGAGTGATGCCAGGGTTGCTTCAGTTAAGTGTGGATGGAACTTGGAGAGCCAAATCCATGGCTAGAGAACTGTTGTTGCTTCTGAGGGACTGCTCCAATTATAGCTCAAGATGTAAACAGATTAATCATGAGCAGATAGAAAGGATAATGGATGAAATTGAAGCAGAAGGAGAGACATTTGCAGATACTACTTTGAGGCTAGTAGAGGAGATGATTGCAAAGCTCCATGCTTAG 987 0.4407 MAKEVVESLWNGGEESQIQAALELCRFSSRQRQKLEESRVMVPLVSMLHSENYEAIEAALCALLSLSFGCERNKIRIIKSGALPVLLSLLHGDSQRVAQLTLAAMLTLSSCKANKVAIASSGAVQLLAEFVNSNCSTQSQLDAIATLHNLATCQEIVPLIVSSGVMLSLLELIHTSVKSTPLVEKAIGLLENLMSSSESALCEAASTMGAIRILVETVEDGSSLSKEHAVCILLLVCQSCREKYRGLILTEGVMPGLLQLSVDGTWRAKSMARELLLLLRDCSNYSSRCKQINHEQIERIMDEIEAEGETFADTTLRLVEEMIAKLHA* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0064 328 Pfam Kinesin-associated protein (KAP) 32 170 - -
Pvu4g0064 328 Gene3D - 2 327 IPR011989 -
Pvu4g0064 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 164 199 IPR000225 GO:0005515
Pvu4g0064 328 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 308 - -
Pvu4g0064 328 PANTHER U BOX DOMAIN-CONTAINING 1 308 - -
Pvu4g0064 328 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 81 123 IPR000225 GO:0005515
Pvu4g0064 328 SUPERFAMILY ARM repeat 4 302 IPR016024 -
Pvu4g0064 328 SMART arm_5 153 195 IPR000225 GO:0005515
Pvu4g0064 328 SMART arm_5 28 68 IPR000225 GO:0005515
Pvu4g0064 328 SMART arm_5 111 152 IPR000225 GO:0005515
Pvu4g0064 328 SMART arm_5 70 110 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0064 Pvu-Chr4 506365 508047 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0064 4 281 U-box Gene Family AT3G54790 32.624 6.58e-27 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0064 - - gmx:100778534 523.087