Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu4g0060 | ATGGCACTATTGCTTAGCTATGCAGCAGCAACAGTTGCAGCACTCTTCTGCATCATGTATTTCTTCCATCGGAGAGCATGTTGCAGGTACCCTCTCTTCACTGACTACCCCATCCTTGGCATGCTACCACAGTTACTCTTCAATTTGTCGCGTTTCCATGATTTTTTCACTGAGATATTGAAAGAGAAGGGGGGAACTGGTGAGTTCACCGGACCATGGTTTACCAACATGAACTATTTGTTCACGAGTGACCCCCTAAACGTGCGCCACGTCATGAGCACGAGTTTCCACAACTACGTGAAGGGACCCGTGTTTCGTGACATTTTTGAAGTCTTGGGAGAAGGGATTGCAGCCACTGATTCAGAAGCATGGAAATACAACAGGGATCTCATTCATTATCTCTTCAAACAGAAAAAGTTCGAGGTGTTTCTAGAGAAAACCATTCACAAGAAGATCAAGAATAGCCTACTTCCCGTATTGGATCATGTACACCAACAAGGGAGCGTGGTGGATCTTCAAGATCTCTTCAACCGCTTCACTTTCGATAACTTATGTTATTCAGTTAATGGCCATGACCCTAATTGCCTTTCCGTGGATTTTCCCGAAGTTGAAATTGAGAAGGCCTTTAATGATGCGGGAGAGACCATTTTTCGCAGACATGTAGTGCCAAAGTGTGTTTGGAAGCTGCAGAAATGGCTTCAGATTGGGCAAGAGAAGAAGATGACAGAAGCGTGTAAGAATCTTGATGAGTTCATATATGCATGCATAGCGTCCAAGAGAAAAAATCTTAGCAAGTGCATAGAAAAAAATGAAACGGAAGAAACTTCTGATGTTGACTTGTTGACAACTTTGATGAGAGAAGGGAAGGAAAAAGGAGAAGAACATGATGATATATTTCTAAGAGATACTGTGTTCAATTTTTTTGTGGCTGGGAGAGATGCCGTAACTTCAGCTCTCACTTGGTTCTTTTGGCTTGTTGCTACAAACCCTTTGGTGGAAGCCAAGATTCTTGAAGAGATCAAAGAAACGTTTGGAAGAAATGAAAAGAAAGCAGAGGTTTTAAGTGTGGAAGAAGTGAAAAAACTGGTTTATCTGCATGGTGCTATATGTGAATCATTGAGGCTGTTTCCTCCCATACCCTTAGAACGCAAGGAAGCACTTAAATCTGATGTGCTTCCTAGTGGTCATGGTGTTAATCCAAGTACAGTTATAATGTTTTTCTTGTATTCAATGGGAAGATCTGAGGAAATATGGGGAGAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATTTCAGAGAAAGGAGGTATTGTTTATGTACCATCTTACAAATTTGTTGCTTTTAACACAGGACCTAGGACTTGCTTGGGCAAAGGTGTCTCCTTCATTCAAATTAAGATGGTGGCAACTGCAATTTTGCACAAGTATCGTCTCCAAGTGGTGGAAGGTCATGTTGCTAAGCCAAACCTTCAAACGTTCTTCTGA | 1485 | 0.4189 | MALLLSYAAATVAALFCIMYFFHRRACCRYPLFTDYPILGMLPQLLFNLSRFHDFFTEILKEKGGTGEFTGPWFTNMNYLFTSDPLNVRHVMSTSFHNYVKGPVFRDIFEVLGEGIAATDSEAWKYNRDLIHYLFKQKKFEVFLEKTIHKKIKNSLLPVLDHVHQQGSVVDLQDLFNRFTFDNLCYSVNGHDPNCLSVDFPEVEIEKAFNDAGETIFRRHVVPKCVWKLQKWLQIGQEKKMTEACKNLDEFIYACIASKRKNLSKCIEKNETEETSDVDLLTTLMREGKEKGEEHDDIFLRDTVFNFFVAGRDAVTSALTWFFWLVATNPLVEAKILEEIKETFGRNEKKAEVLSVEEVKKLVYLHGAICESLRLFPPIPLERKEALKSDVLPSGHGVNPSTVIMFFLYSMGRSEEIWGEDCMEFKPERWISEKGGIVYVPSYKFVAFNTGPRTCLGKGVSFIQIKMVATAILHKYRLQVVEGHVAKPNLQTFF* | 495 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu4g0060 | 494 | Gene3D | Cytochrome P450 | 31 | 492 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PANTHER | CYTOCHROME P450 | 8 | 488 | - | - | |
| Pvu4g0060 | 494 | Pfam | Cytochrome P450 | 33 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | E-class P450 group I signature | 299 | 316 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | E-class P450 group I signature | 319 | 345 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | E-class P450 group I signature | 366 | 384 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506|GO:0016705 | |
| Pvu4g0060 | 494 | PANTHER | CYTOCHROME P450 FAMILY PROTEIN | 8 | 488 | - | - | |
| Pvu4g0060 | 494 | PRINTS | P450 superfamily signature | 310 | 327 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Pvu4g0060 | 494 | SUPERFAMILY | Cytochrome P450 | 35 | 486 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu4g0060 | Pvu-Chr4 | 460686 | 469008 | Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pvu4g0060 | 14 | 488 | Cytochrome P450 | AT4G39490 | 46.154 | 1.36e-152 | 443 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu4g0060 | - | - | gmx:100792360 | 745.732 |