Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0054 ATGGAACTGTTCTTGGTTGGCTATGCAGCAGCCACAGTTGCAGCACTCCTCTGCGTAGTTTTCCATCGCAGAAGATGTTGCACGCACCCCATCTTCACCGAATACCCTTTTGTTGGAATGCTCCCACAAGTTCTTTGTAATCTGTGGCATGCCCATGATTATTCAACTCAGGTTTTGAAACAACATGGAGGCACTGCTGAGTTCGGTGGACCATGGTTTACCAATATGAACTACTTGGTCACTTGTGATCCCCTCAACGTGCACCACATGCTGAGCAAAAACTTCCACAACTACGTCAAGGGACCCGAGTTTCGAGACATTTTTCAGGCTTTTGGAGATGGGATTTTCACTGCTGATGGAGAAGCTTGGAAATACAGCAGAGATCTCTTCCATTCTTTGTTCAAACATAAAAGCTTCGAGGTTTTGCTGGAGAAAACCATTCACAAGAAGGTGCAGAATAGCCTACTTCCTGTATTGGATCATGTGCAACAACAAGGGAGGGTGGTGGATCTTCAAGATCTCTTCAACCGCTTCACTTTCGATAATATATGTTCTACAGTTCTTGGACGTGACCCTGAATGCCTTTCCATTGATTTTCCAGAAGTTGCAGTTGAGAAGGCTTTTAACCAAGCAGAAGAGTGCATATTCTACAGACATATAGTGCCGAAGTCTGTTTGGAAGGTGCAGCAATGGCTTCAAATTGGGCAAGAGAGGAAGATGACAGAAGCGTGTAAGACGCTTGATGAGTTCATATATTCATGCATAGCGTCTAAGAGAGAAGATCTTATGGAAAATGAAACAGGGAAAACTTTTCAGGTTGACTTGTTGACAACTTTGATGAGAGAAGGAAAGGGAAAGGGAGAAGCACACGATGATACATTTCTAAGAGATGCTGTGTTCAATCTTTTTGTGGCTGGGAGAGATACCATAACTTCAGCTCTCACGTGGTTCTTTTGGCTTGTTGCTACAAACCCTTTGGTGGAAGCCAAGATTCTTGAAGAGATCAAAGAAACGTATGGAAGAAATGAAGAGAAAGCTGAGGTTTTAAGTGTGGAAGAAGTGAAAAAACTGGTTTATCTGCATGGTGCTATATGTGAAACACTGAGACTCTTTCCTCCTATACCTTTCGAACGCAAGCAAGCCCTTGAAGCTGACATGCTTCCTAGTGGGCATGGTGTTGATTCCAGAACAAAGATACTGTTGTTTTTGTATGCAATGGGAAGGCTTGAAGAAACATGGGGAAAAGATTGCATGGAGTTCAAGCCAGAGAGATGGATATCGAAGAGAGGAGGAAACGTTTATGAACCGTCTTACAAATTCATTGCTTTCAATGCAGGACCAAGGAATTGCTTGGGGAAAGACTTGTCCTTCATCCAGTTGAAGATGGTGGCAGCAGCTATTTTGCGGAATTACTGTGTGAAAGTGGTGGAGGGTTATGTTGCTTCTCCTAGCCTCTCTATTGTTCTTCTTATGAAGGATGGTTTGAAGGTAAAGATCACAAAGAGAAAATTTTAG 1515 0.4297 MELFLVGYAAATVAALLCVVFHRRRCCTHPIFTEYPFVGMLPQVLCNLWHAHDYSTQVLKQHGGTAEFGGPWFTNMNYLVTCDPLNVHHMLSKNFHNYVKGPEFRDIFQAFGDGIFTADGEAWKYSRDLFHSLFKHKSFEVLLEKTIHKKVQNSLLPVLDHVQQQGRVVDLQDLFNRFTFDNICSTVLGRDPECLSIDFPEVAVEKAFNQAEECIFYRHIVPKSVWKVQQWLQIGQERKMTEACKTLDEFIYSCIASKREDLMENETGKTFQVDLLTTLMREGKGKGEAHDDTFLRDAVFNLFVAGRDTITSALTWFFWLVATNPLVEAKILEEIKETYGRNEEKAEVLSVEEVKKLVYLHGAICETLRLFPPIPFERKQALEADMLPSGHGVDSRTKILLFLYAMGRLEETWGKDCMEFKPERWISKRGGNVYEPSYKFIAFNAGPRNCLGKDLSFIQLKMVAAAILRNYCVKVVEGYVASPSLSIVLLMKDGLKVKITKRKF* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0054 504 PANTHER CYTOCHROME P450 10 502 - -
Pvu4g0054 504 SUPERFAMILY Cytochrome P450 34 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 Pfam Cytochrome P450 33 495 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 443 452 IPR017972 GO:0005506|GO:0016705
Pvu4g0054 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS E-class P450 group I signature 440 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS E-class P450 group I signature 450 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 Gene3D Cytochrome P450 21 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS P450 superfamily signature 441 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PRINTS P450 superfamily signature 450 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu4g0054 504 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0054 Pvu-Chr4 395119 396899 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0054 33 502 Cytochrome P450 AT4G39490 46.377 2.22e-159 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0054 - - gmx:100792360 796.193