Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0045 ATGGTGTCGATACTTTATCTCTTGCTAACCATGGTTCTTGGCATGCAAGTGAAAGGCATTGATGGTGGAGTGGTGGCTTTTGAAGCAAAAGATGGACTTTTTCCATCGAAAGTACTCATTGAAATGATGAATTTCATAGAGAAGGAGCACTTGATTGTTCACTGCAAGGACAAGCACCATGATCTCGGGGCTCATACAATCAACACTGGTGAAACATACAGCTTTGTTGTTACTCCTAATGTCTTTGCAAAGGTAACATTGTACTTCTGTAAGTTTTATCTTGGAAGTTCAAGTCACTATTTTGATATTTATAGACAAGATCGAGATAATTGTCCTGGTCATGATTGTTACTGGGGCATATTTGAGGATGGACTTTGTAGGCTTAATCTCAAATCTCGTCAATGCTACGGCTGGAATGAAAACTGA 426 0.392 MVSILYLLLTMVLGMQVKGIDGGVVAFEAKDGLFPSKVLIEMMNFIEKEHLIVHCKDKHHDLGAHTINTGETYSFVVTPNVFAKVTLYFCKFYLGSSSHYFDIYRQDRDNCPGHDCYWGIFEDGLCRLNLKSRQCYGWNEN* 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0045 141 PANTHER S-PROTEIN HOMOLOG 18-RELATED 26 138 - -
Pvu4g0045 141 Pfam Plant self-incompatibility protein S1 42 138 IPR010264 -
Pvu4g0045 141 PANTHER - 26 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0045 Pvu-Chr4 338954 339379 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0045 51 140 Carbohydrate Esterase AT3G16970 40.404 1.45e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0045 - - pvu:PHAVU_004G004500g 303.908