Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0043 ATGGTCTCATTACTTTATCTGCTGCTAACCATGGTTCTTGGCATGCAAGTGAAAGGCAATGATGGTGGAGTGGTGGTTTCTGAAGCAAAAGATGGATTTTTTCGACCTAAAGTAACCATTGAAATGACGAACATGCTGAAGCAACACTTGATTGTTCACTGCAAGGATAAACACCATGATCTTGGGGCTCAGATAATCAAAACTGGTGAAACATACAGTTTTGTTGTTACTCCTAATATCTTTAAAAAGGTAACATTGTACTTTTGTAAGTTTTATTTTGCAAGTTCGAGTTACTATTTTGATATTTATAGACAAGATCGAGATGATTGTCCTGATCATGTTTGTTACTGGAGTATATTCGAGAAAGGACCTTGTAGGATTAATTTCGTATCTCCTCAATGCTTCCGCTGGAATGACAAATGA 423 0.3664 MVSLLYLLLTMVLGMQVKGNDGGVVVSEAKDGFFRPKVTIEMTNMLKQHLIVHCKDKHHDLGAQIIKTGETYSFVVTPNIFKKVTLYFCKFYFASSSYYFDIYRQDRDDCPDHVCYWSIFEKGPCRINFVSPQCFRWNDK* 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0043 140 PANTHER - 26 137 IPR010264 -
Pvu4g0043 140 Pfam Plant self-incompatibility protein S1 40 130 IPR010264 -
Pvu4g0043 140 PANTHER S-PROTEIN HOMOLOG 18-RELATED 26 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0043 Pvu-Chr4 335397 335819 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0043 11 140 Carbohydrate Esterase AT3G16970 31.915 6.06e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0043 - - pvu:PHAVU_004G004500g 223.016