Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0042 ATGGTATCATTATCCAAAATGATGTTATTACTTTCTTTGTTTTTAACAACACTTCTTCCGTCGCAATTGAAAGGGAGTGAGGGTGGAGGAGAAGAAGGGCTTCTTCCCTCCAAAGTGCATGTCGCAATAACCAATTTTCTAGTTCACGATAACTTGACTGTTCATTGCAAAGACAAGCACAATGATCTCGGGGCTCACACATTGAAGGCTGAGGAAACATACACTTTTGTTTTTAGACCTAATTTCTTTTTCAATGTTACCTTGTACTTTTGTCGCTTTGTATGGGTAGGAGCAAGTCATTATTTCGACATTTATGTACAAGATAGAGATAAATGTGTTGAATGTCATTGA 351 0.3732 MVSLSKMMLLLSLFLTTLLPSQLKGSEGGGEEGLLPSKVHVAITNFLVHDNLTVHCKDKHNDLGAHTLKAEETYTFVFRPNFFFNVTLYFCRFVWVGASHYFDIYVQDRDKCVECH* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0042 116 PANTHER S-PROTEIN HOMOLOG 18-RELATED 32 115 - -
Pvu4g0042 116 Pfam Plant self-incompatibility protein S1 40 115 IPR010264 -
Pvu4g0042 116 PANTHER - 32 115 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0042 Pvu-Chr4 332801 333151 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0042 36 111 Carbohydrate Esterase AT3G16970 40.789 1.40e-14 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0042 - - pvu:PHAVU_004G004200g 211.46