Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0039 ATGATTTTAGTGTCCAAAATTACACTAGTATATACTTTGTTGTTAACAATATTTCTTGGTATGCAACTGAAGTGTGGTGAGAGTATTGCTCCTATCCTTCCCACCAAAGTAACAGTTCAAATAACCAATAGCATATTCAATGGATATTTGGATGTTCATTGCAAAAGCAAAGACAATGATCTCGGAGTGCAACATCTGAATGTTCAACAATCATATAGTTTTTCGTTTTTTCCTAAGTTTTTTTTCCCTTCGACTTTGTATTTTTGTCGTTTTATATGGACAGGAGGAGATCATTATTTTGATATATATGTTCAAAATCGAGATGGATACTGCAAAGACAATCTTTGTTCTTGGAACATACTTGGCAATGGACCATGTAGATGGATATCGGGAGCTCTAAAGTGTTTTCCATGGAATCCACCTGCTGTAGGACAAAGATTGCTTCTGCAACTAAGTAATAACACTTTATCTGTGTAA 477 0.3459 MILVSKITLVYTLLLTIFLGMQLKCGESIAPILPTKVTVQITNSIFNGYLDVHCKSKDNDLGVQHLNVQQSYSFSFFPKFFFPSTLYFCRFIWTGGDHYFDIYVQNRDGYCKDNLCSWNILGNGPCRWISGALKCFPWNPPAVGQRLLLQLSNNTLSV* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0039 158 PANTHER S-PROTEIN HOMOLOG 18-RELATED 14 138 - -
Pvu4g0039 158 PANTHER - 14 138 IPR010264 -
Pvu4g0039 158 Pfam Plant self-incompatibility protein S1 38 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0039 Pvu-Chr4 321582 322058 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0039 36 139 Carbohydrate Esterase AT3G16970 40.179 4.10e-18 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0039 - - pvu:PHAVU_004G003100g 184.882