Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0038 ATGGCGGATTCAACCTCCAAAGTTATGATAATACTCTCTCTGTTGTTAATTCTTGCTCTGCAATTGAAAGGTAGTGATAGATTCAGAATCACTACCACAAAAGTTACTGTTGAAATAACCAACAGATTGAACAAGAAGATCTTGATTCTTCATTGCCAAGAAAAACACAGAGATTTGGGAGTTCATGTACTTAATGTTGGAGAAACATATAGTTTTCGATTTTACCCCAATTACTTTCTTCCTGTTACCTTGTACTTCTGTCGCTTTGTTTATTTAGGTGGTGATCATTATTTTGACATTTATGTAGAAAGAAGGGATGAATATTGTTTTCACAATCGATGTTCTTGGGAGATTGTTGAAGATGGACCATGTGAGATTAAACCTAGTTCTCGTGAATGCTTTGGTTGGAATGTAGCTTCTCTTCCTGCAAACAAATAA 438 0.3516 MADSTSKVMIILSLLLILALQLKGSDRFRITTTKVTVEITNRLNKKILILHCQEKHRDLGVHVLNVGETYSFRFYPNYFLPVTLYFCRFVYLGGDHYFDIYVERRDEYCFHNRCSWEIVEDGPCEIKPSSRECFGWNVASLPANK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0038 145 PANTHER S-PROTEIN HOMOLOG 18-RELATED 14 136 - -
Pvu4g0038 145 PANTHER - 14 136 IPR010264 -
Pvu4g0038 145 Pfam Plant self-incompatibility protein S1 36 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0038 Pvu-Chr4 319992 320429 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0038 34 141 Carbohydrate Esterase AT3G16970 39.130 5.57e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0038 - - pvu:PHAVU_004G003500g 289.271