Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0035 ATGGTGGATTCAACCTCCAAAGTTATGATAATACTCTCTCTGATGTTAATTCTTGCTATGCAACTGAAAGGTAGCGATAGATTCAGAATCACTACCACAAAAGTTACTGTTGAAATAACCAACAGATTGAACAAGAAGATCTTGATTCTTCATTGCCAAGAAAAACACAGAGATTTGGGAGTTCATGTACTTAACGTTGGAGAAACATATAGTTTTCGATTTTACCCTAATTACTTTCTTCCTGTGACCTTGTACTTTTGTCGCTTTGTTTATTTAGGTGGTGATCATCATTTTGACATTTATGTAGAAAGAAGGGATGAATATTGTTTTCACAATCGATGTTCTTGGGAGATTGTTGAAGATGGACCATGCGAGATTAAACCTAGCTCTCGTGAATGCTTCAGTTGGAATGTAGCTTCTCTTCCTGCAAACAAATAA 438 0.3584 MVDSTSKVMIILSLMLILAMQLKGSDRFRITTTKVTVEITNRLNKKILILHCQEKHRDLGVHVLNVGETYSFRFYPNYFLPVTLYFCRFVYLGGDHHFDIYVERRDEYCFHNRCSWEIVEDGPCEIKPSSRECFSWNVASLPANK* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0035 145 Pfam Plant self-incompatibility protein S1 36 136 IPR010264 -
Pvu4g0035 145 PANTHER S-PROTEIN HOMOLOG 18-RELATED 12 136 - -
Pvu4g0035 145 PANTHER - 12 136 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0035 Pvu-Chr4 311909 312346 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0035 34 141 Carbohydrate Esterase AT3G16970 39.130 1.41e-17 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0035 - - pvu:PHAVU_004G003500g 302.367