Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0034 ATGATGGTTATAATGTCCAAAATTACTGCAATACTTTGTTTATTGTTCACAATATTTATCGGTGATCAATTGAAGTGTGGTGAGAGTCATGTTCCTATTCTTCCCACTAGGGTAACAGTTGAAATAACTAATCGCTTAATAGATAGATATTTAGCTGTTCGATGCAAAGATAAACACAATGATTTCGGGGTGCAATATTTGAATGTTGGCGAAACATTTAGTTTTAGGTTTTTTCCTAAGTATTATTATCCTTCTACCTTGTTCTTTTGTCAATTTGTATGGTTGGAAGGAGATTATTATTTTGATATATATGTCCAAGACCGAGATGGATATTGTCATCATAATAAGTGTTCTTGGGACATAGTTGCTAAGGGACCATGTCAGACCGATGGGATTCGAGAGTGTTATGGATGGAATCCACCTGCCGACGAGAAGATTGCTCCTGCAATAGAATAA 456 0.3553 MMVIMSKITAILCLLFTIFIGDQLKCGESHVPILPTRVTVEITNRLIDRYLAVRCKDKHNDFGVQYLNVGETFSFRFFPKYYYPSTLFFCQFVWLEGDYYFDIYVQDRDGYCHHNKCSWDIVAKGPCQTDGIRECYGWNPPADEKIAPAIE* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0034 151 PANTHER S-PROTEIN HOMOLOG 18-RELATED 16 138 - -
Pvu4g0034 151 PANTHER - 16 138 IPR010264 -
Pvu4g0034 151 Pfam Plant self-incompatibility protein S1 39 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0034 Pvu-Chr4 304498 304953 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0034 12 139 Carbohydrate Esterase AT3G16970 33.803 1.73e-14 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0034 - - pvu:PHAVU_004G003100g 206.838