Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0032 ATGATGGTTTTAATGTCTAAAATGAGAGTAATAGTTTGTTTGTTCTTAGTAATATTTGTTGGTGTGCAATTCGAGTATGGTGAGAGTGAGGGTGGTGGTGCTCCTTTTATTCCCACTAAAGTGACTGTTGACATAACTAATCGCTTAGAAAAAAGATATTTGGCTCTTCGATGCAAAGATAAACACCATGATCTAGGGTTGCAGCAACTCAATGTTGGTCAAACATTTAGTTTCAGGTTTTATCCTAACTATTTTATTAATGCGACCTTGTACTTTTGTCATTTTGTATGGTCGGGAGGAGATCATCATTTTGACATATATGTCGAAGAAAGAGATGAATATGGTCACCACAATAGATGTTCTTGGGATATATTTGCAACTGGACCATGTAAATACAACCCAGGACCTCAACAGTGCTTTAAATGGACTTCACCTGCTGCAAGAAAAAGATTGCTTCTCAAAAAAAGTAATAATACTTTATTTATGTAA 489 0.3517 MMVLMSKMRVIVCLFLVIFVGVQFEYGESEGGGAPFIPTKVTVDITNRLEKRYLALRCKDKHHDLGLQQLNVGQTFSFRFYPNYFINATLYFCHFVWSGGDHHFDIYVEERDEYGHHNRCSWDIFATGPCKYNPGPQQCFKWTSPAARKRLLLKKSNNTLFM* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0032 162 Pfam Plant self-incompatibility protein S1 42 142 IPR010264 -
Pvu4g0032 162 PANTHER S-PROTEIN HOMOLOG 18-RELATED 15 142 - -
Pvu4g0032 162 PANTHER - 15 142 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0032 Pvu-Chr4 298850 299400 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0032 12 146 Carbohydrate Esterase AT3G16970 36.806 1.10e-17 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0032 - - pvu:PHAVU_004G003100g 310.842