Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0030 ATGATGATTTTAATGTCTAAATTTAGAGCAATAGTTTGTTTATTCTTAGTAATATTTGTTGGTGTGCAATTCGAGTGTGGTGAAAGTGGTTCTCCTCTTCTTCCAACTAAAGTGACTGTTGAAATAACTAATCGCTTAACAGATAGATATTTGGCTGTTCAATGCAAAGATAAACATCATGATCTCGGGGTGCAACAACTCAATGTTGGTCAAACATTTAGTTTCAACTTTTATCCTAACTTCTTTTTAACTTCGACCTTGTACTTTTGTCATTTTGTATGGTTGGAAGGAGATCGCTATTTTAACATATATGAAGAAGATATAGACGGATATTGTGACCACCACCACACATGTTATTGGGATATACTTGCGACTGGGCCATGTAAATACCAACCGGGACCTCGACGATGCTTTAGATGGAATCCACCTGCTTTAAGAAAAAGATTGCTTCTCGAAAAAAACAATAATACTTTATCTATGTAA 483 0.3499 MMILMSKFRAIVCLFLVIFVGVQFECGESGSPLLPTKVTVEITNRLTDRYLAVQCKDKHHDLGVQQLNVGQTFSFNFYPNFFLTSTLYFCHFVWLEGDRYFNIYEEDIDGYCDHHHTCYWDILATGPCKYQPGPRRCFRWNPPALRKRLLLEKNNNTLSM* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0030 160 Pfam Plant self-incompatibility protein S1 39 140 IPR010264 -
Pvu4g0030 160 PANTHER S-PROTEIN HOMOLOG 18-RELATED 14 140 - -
Pvu4g0030 160 PANTHER - 14 140 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0030 Pvu-Chr4 290215 290697 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0030 20 145 Carbohydrate Esterase AT3G16970 33.813 8.88e-13 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0030 - - pvu:PHAVU_004G003100g 257.299