Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0029 ATGATGGTTTTAATGTCTAAGATTAGAGCAATGTTTTGTTTGTCGTTAATAATACTTCTTGGTGTGCAATTGAAGTGTGGTAGTGGTGTTCCTCTTATCCCCCATAAACAGACCGTTCAAATAACTAATCGTTTAGTAGATAGATATTTGGGTGTTCAATGCAAAGAGAAACAACATGATCTAGGGGTGCATCAAATCAATGTTGGTGAATCATATAGTTTTAAGTTTTATCCTAACTACTTTTTTGATATTACCTTGTACTATTGTCATTTTGTATGGTTGGAAGGAGATCATTATTTCGACATATATGACGAACACAGAGATGATTATTGCGATAAGAACTTATGTTCTTGGGAAATATTTGCGACAGGGCCATGCAAATTCGAATTTGGATCTCGAAAGTGCTTCAAATGGAATAAATTGGCTGCCGGACAAAGATTGCTTCTGGAAGAAAGTAATAGTACTTTATCTATGTAA 477 0.3438 MMVLMSKIRAMFCLSLIILLGVQLKCGSGVPLIPHKQTVQITNRLVDRYLGVQCKEKQHDLGVHQINVGESYSFKFYPNYFFDITLYYCHFVWLEGDHYFDIYDEHRDDYCDKNLCSWEIFATGPCKFEFGSRKCFKWNKLAAGQRLLLEESNSTLSM* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0029 158 Pfam Plant self-incompatibility protein S1 38 138 IPR010264 -
Pvu4g0029 158 PANTHER S-PROTEIN HOMOLOG 18-RELATED 16 138 - -
Pvu4g0029 158 PANTHER - 16 138 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0029 Pvu-Chr4 285846 286322 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu4g0029 13 139 Carbohydrate Esterase AT3G16970 33.571 8.11e-15 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0029 - - pvu:PHAVU_004G003100g 223.016