Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu4g0024 ATGTCTTCTTCTTGTTTCTCTAGCAGATGGACAGCTGAGGAGAACAAAGCGTTTGAAAGAGCTCTAGCAGTTCATGACAAGGACACCCCCAACCGTTGGTGCAACATTGCAATGGCTGTTGGTGGCAAAACTCCAGAGGAAGTTAAGAGGCACTATGATCTCCTTGTGGAGGACATCAGGCGTATTGAGTCAGGCCAAGTGCCCTTTCCAACCTATAGGAATCTCAAAGACGGGGCATAA 240 0.4792 MSSSCFSSRWTAEENKAFERALAVHDKDTPNRWCNIAMAVGGKTPEEVKRHYDLLVEDIRRIESGQVPFPTYRNLKDGA* 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu4g0024 79 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 75 IPR044636 GO:0003700
Pvu4g0024 79 ProSiteProfiles SANT domain profile. 6 60 IPR017884 -
Pvu4g0024 79 SUPERFAMILY Homeodomain-like 8 64 IPR009057 -
Pvu4g0024 79 CDD SANT 9 52 IPR001005 -
Pvu4g0024 79 Pfam Myb-like DNA-binding domain 8 52 IPR001005 -
Pvu4g0024 79 SMART sant 6 58 IPR001005 -
Pvu4g0024 79 ProSiteProfiles Myb-like domain profile. 8 56 IPR001005 -
Pvu4g0024 79 Gene3D - 2 69 - -
Pvu4g0024 79 PANTHER TRANSCRIPTION FACTOR MYB/SANT FAMILY-RELATED 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu4g0024 Pvu-Chr4 246098 246589 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu4g0024 Myb_DNA-binding 4.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu4g0024 - - gmx:100784910 145.206