Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g3056 ATGGGAAAGAAGGGGAGTTGGTTTTCTGCAATCAAGAGGGTTTTCACTCACCACTCCAAGGGGAAACCGGATGCAGATAACAAAGGCACAAAAGAAAAGAAGAAAAGTCTAGGAAAAGTAAAGCATGGAGAGACCAATTCATTCATCCCCCTCTTCAGAGAGCCAAGTAGCATTGAGAAAATCTTTGGGGACTTTGAAAGGGAGCAACAACTACTGGGGTTAAGGCCTGCCACTCCTCCTGAGAGACCCAAAACTCCACCTTATGTCCCTCCAAGAGCTCCTTCTCCTAGGCCTCCTTCTCCAAGGGCTCCTTCTCCAAGGCCTCCATCTCCAAGGGCTGCTTCTCCCAGGGCTTCTTCGCCACGAGTTACCAGTACCTCTCCCAAAGCTGCATCTTTCCGGATTTCTCATCACCACAAGGAGGTTGGCTACAGACCAGAACCAACTTTGAGGCACCAGAATGCCTCAGCTACTAAGATCCAGGCTGTTTATAGAGGTTATATGGGAAGGAGGAGTTTTAGAGCACTAAAGGGTCTGGTGAGGCTCCAAGGAGTAGTAAGAGGACAGAATGTGAAGAGGCAGACAGTAAATGCCATGAAGCACATGCAACTGTTAGTGCGAGTTCAATCTCAGATTCAGTCTCGAAGGATCCAGATGTTGGAAAACCAGGCACGATATCAAGCTGAGTTCAAGAATGATAAGGAAGCAGCCAGTATCTTGGGAAAACTCACTTCTGAAGCAGGTAATGAAGAGTGGGATGATAGCTTACTGACCAAAGAGGAAGTAGAGGCAAGGTTGCAGAGGAAGGTGGAAGCAATCATCAAAAGAGAAAGAGCAATGGCATTTGCATATTCCCATCAGCTATGGAAAGCCACTCCAAAATCAAGTCACACCCCAGTGACAGATGCACGATCAGGTGGATTTCCTTGGTGGTGGAACTGGTTGGAAAGACAAGCACCTGCAGCAGCAGCAACTCCACAAGAAAGACAAGTGCTGAAGAATTTTCAACTCACACCTCCAAGACCATACTCAGAGCAAAAGACTAGTCCAAGACCCGGATCCAGCACTCAAAGACAACAGCAGTCTCATTTTGCCTTTGATAACATGGACACTCCCACACCAAAGTCCACAAAATCAACCATAGTGACATCTTCAAAACCGGTACGAACACCTCCATATAGAACTCCTCAGGCAAACAGTTCAGGCTCTGGGTCTAAATATCTGAGACCAAGGGGTGTGGGAGCCAATATACCTTTTGATGTGCCACTGAAGGATGATGACAGTCTCACAAGCTGCCCACCATTTTCAGTGCCAAACTACATGGCTCCAACCCTCTCTGCCAAGGCCAAAGTACGTGCTAGTAGTAATCCTAGAGAAAGGCTTGGTGGGACTCCAACAAGTACTGATTCAAAGAGGAGACTCTCATTCCCATTGTCACAAGGAATAGGGTCTTTCAAGTGGTCTAAAGGGTTCTCAAGCAAGGATCAAAGGGTGCCAGATAAATTTCAGCCACTTGAATCTATAGGGAACGTGAGTGTGGATTCAACAGTGTCTTTGCCCGCAAGGGTGGGAAGAAAGCCGTTTACAAGATTTGTGTGA 1599 0.4709 MGKKGSWFSAIKRVFTHHSKGKPDADNKGTKEKKKSLGKVKHGETNSFIPLFREPSSIEKIFGDFEREQQLLGLRPATPPERPKTPPYVPPRAPSPRPPSPRAPSPRPPSPRAASPRASSPRVTSTSPKAASFRISHHHKEVGYRPEPTLRHQNASATKIQAVYRGYMGRRSFRALKGLVRLQGVVRGQNVKRQTVNAMKHMQLLVRVQSQIQSRRIQMLENQARYQAEFKNDKEAASILGKLTSEAGNEEWDDSLLTKEEVEARLQRKVEAIIKRERAMAFAYSHQLWKATPKSSHTPVTDARSGGFPWWWNWLERQAPAAAATPQERQVLKNFQLTPPRPYSEQKTSPRPGSSTQRQQQSHFAFDNMDTPTPKSTKSTIVTSSKPVRTPPYRTPQANSSGSGSKYLRPRGVGANIPFDVPLKDDDSLTSCPPFSVPNYMAPTLSAKAKVRASSNPRERLGGTPTSTDSKRRLSFPLSQGIGSFKWSKGFSSKDQRVPDKFQPLESIGNVSVDSTVSLPARVGRKPFTRFV* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g3056 532 MobiDBLite consensus disorder prediction 335 411 - -
Pvu3g3056 532 MobiDBLite consensus disorder prediction 17 41 - -
Pvu3g3056 532 PANTHER IQ-DOMAIN 5-RELATED 1 529 - -
Pvu3g3056 532 Pfam Protein of unknown function (DUF4005) 391 483 IPR025064 -
Pvu3g3056 532 MobiDBLite consensus disorder prediction 117 132 - -
Pvu3g3056 532 PANTHER IQ-DOMAIN 13 1 529 - -
Pvu3g3056 532 MobiDBLite consensus disorder prediction 335 406 - -
Pvu3g3056 532 Gene3D - 151 224 - -
Pvu3g3056 532 Pfam IQ calmodulin-binding motif 155 174 IPR000048 GO:0005515
Pvu3g3056 532 MobiDBLite consensus disorder prediction 1 142 - -
Pvu3g3056 532 SMART iq_5 152 174 IPR000048 GO:0005515
Pvu3g3056 532 MobiDBLite consensus disorder prediction 79 115 - -
Pvu3g3056 532 MobiDBLite consensus disorder prediction 451 472 - -
Pvu3g3056 532 ProSiteProfiles IQ motif profile. 153 181 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g3056 Pvu-Chr3 52227296 52232952 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g3056 1 531 IQD Protein Family AT3G59690 51.241 1.81e-164 475
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g3056 - - gmx:100807777 846.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g3056 3 52227296 52232952 Pvu3g3056 3 52227296 52232952 ECH