Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g3021 ATGCATATGCATATGCATGGTTACTCATTTGGGTTGGTGAAGGTTTCACGGGGTGGAACCATTTCTGGTCTCTTTCTTCACCCACCAACTCTAAATCCACTGGCCCACACCCAACCACGTCAAACCCTTTCTGCTTTTGCTTCTTCTTCAAAAACACTTCTTTTTTTAAACCAAATGGATCCCTCTGCTATCACTGTTGTGCCAGGAATGGATATGCCCATCATGCATGACAGTGATCGCTACGAACTTGTGCGTGACATTGGTTCTGGCAACTTCGGTGTAGCCAGGCTCATGAGGGACAAGCTCACCGAGGAACTTGTTGCTGTTAAGTATATTGAGAGAGGTGAAAAGATAGATGAAAATGTACAGAGGGAAATTATAAATCACAGATCTCTGAGGCATCCCAATATTGTGAGGTTCAAGGAGGTTATATTGACACCAACACATTTGGCAATTGTTATGGAATATGCTTCTGGAGGAGAGCTATTTGAGCGAATATGCAATGCAGGGAGGTTCAGTGAGGATGAGGCACGCTTCTTCTTCCAACAACTTATATCAGGGGTTAGCTATTGTCATGCAATGCAAGTGTGCCATCGCGACTTGAAGTTGGAGAACACATTGTTGGATGGTAGTCCAGCTCCTCGTTTGAAGATTTGTGATTTTGGCTATTCAAAGTCCTCAGTGCTACATTCTCAACCAAAATCTACAGTAGGAACCCCTGCATATATCGCTCCAGAAGTTTTGCTTAAGAAGGAATATGATGGCAAGATTGCAGATGTGTGGTCTTGTGGGGTGACCCTATATGTCATGTTGGTGGGTGCATATCCATTTGAGGATCCAGAGGAACCTAAAAATTTCCGCAAGACCATACATAGGATTTTGAATGTTCAGTACTCAATTCCAGACTATGTTCATATATCTTCCGAGTGCCGTCATCTCATATCAAGGATATTTGTTGCTGATCCTGCAAAAAGAATAAGTATTCCTGAGATCAGAAACCACGAGTGGTTTTTGAAGAACCTTCCAAGTGATCTGATGGATGGGAATACGAAGAATGAGTTTGAGGAGGGTGATGAACCAACACAAAGCATTGAAGAAATCATGCAGATAATCAGAGAGGCTACAATTCCTGCAGCTGGATCTCAGTCTCCCAACCATGATCTTACTGGTAGCTTGGATATTGATGAGGACATGGATTCAGATCCTGACCTTGACTTAGATAGCAGTGGAGAAATAGTGTATGCTATATGA 1251 0.4277 MHMHMHGYSFGLVKVSRGGTISGLFLHPPTLNPLAHTQPRQTLSAFASSSKTLLFLNQMDPSAITVVPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKLTEELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYSIPDYVHISSECRHLISRIFVADPAKRISIPEIRNHEWFLKNLPSDLMDGNTKNEFEEGDEPTQSIEEIMQIIREATIPAAGSQSPNHDLTGSLDIDEDMDSDPDLDLDSSGEIVYAI* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g3021 416 ProSitePatterns Protein kinases ATP-binding region signature. 87 110 IPR017441 GO:0005524
Pvu3g3021 416 PANTHER SERINE/THREONINE KINASE 71 410 - -
Pvu3g3021 416 Gene3D Transferase(Phosphotransferase) domain 1 157 345 - -
Pvu3g3021 416 CDD STKc_SnRK2-3 80 336 - -
Pvu3g3021 416 SUPERFAMILY Protein kinase-like (PK-like) 72 345 IPR011009 -
Pvu3g3021 416 SMART serkin_6 81 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g3021 416 MobiDBLite consensus disorder prediction 376 409 - -
Pvu3g3021 416 PANTHER SERINE/THREONINE-PROTEIN KINASE SRK2E 71 410 - -
Pvu3g3021 416 Gene3D Phosphorylase Kinase; domain 1 61 156 - -
Pvu3g3021 416 Pfam Protein kinase domain 81 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g3021 416 ProSiteProfiles Protein kinase domain profile. 81 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g3021 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g3021 Pvu-Chr3 51907761 51912761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g3021 74 347 CBL-interacting serine-threonine protein kinases AT4G24400 43.463 2.05e-68 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Pvu3g3021 Pkinase 1.2e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g3021 K14498 - gmx:100796253 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0220 2 2354541 2360207 Pvu3g3021 3 51907761 51912761 PCT