Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g3003 ATGAACTTCAGGAACTACGATGATAATAACTCTACTTGGGATGCCATCCATGGGAAGACACCGGCAAATGTTGGTTCTCTGTTGAGACAGTCATCAGTATACTCCCTTACATTTGATGAGTTTCAGAGCACCATGGAGGGGATTGGGAAGGAATTTGGGTCCATGAACATGGATGAACTCTTGAAGAACATTTGGACAGCTGAAGAGACTCAGGCCTTGGCATTTTCAGCTGGTACAGGAGAAGGCCACAACCATAACCCAGTTAGTGGTGGTTTGCAAAGACAGGGTTTTTTGACATTGCCAAGGACTCTTAGTCAGAAAACAGTGGATGAGGTTTGGAGGGACTTCATCAAAGATAGTGGTGGGGCCAACGATGGGAGTGGCAATGGTGGTTCATCCATTCCTCAAAGGCAACCAACACTGGGAGAAATGACTTTAGAGGAGTTTTTGGTGAGGGCTGGGGTGGTGAGAGAAGATGTGCCTCAACAACAAATTGGAAAACCAAATAACAATGGATGGTTTGGTGACTTTCCTAGACCAAACAATAACAATGGCCTACTTCTTGGATTCCAACAACCAAACAGAAGTAATAGGAATTTGGGTGAGAGGGTGGTGGAGAACAACAACAACAACTTAGCTCCCAAACAACCTCCTTTATCACTAAACTCAAACCACTCTCAACGACCAACACAACAGCAACCCCCACTTTTTCCAAAGCCATCAAATGTAGCTTTTTCTGCTCCTATGCATTTGTTGAACACTGCTCCACATCCTAGCCCTGCCAGAAGAGGAGGGTTGATGGAGCATTCACTGAATGTTGGAATGGTTGGTTTAGCCTCAGCTAATCCAGAGGCTTCTCCCTCCAGGAAAATATCATCAGATGTAATTTCAAGAAGTAATGTAGACAACTCTTCACTGTCCCCAGTTCATTATGCAATCAACAGGGGAAGGAAATGCAGTGCTATAGAGAAAGTGGTTGAGAGAAGACAAAGGAGAATGATCAAAAATAGAGAATCAGCTGCCAGGTCAAGGGCTCGTAAGCAGGCCTACACTTTCGAACTAGAAGCTGAAGTTGCAAAACTCAAGGAAATAAACAGAGAATTGCAAAGAAAACAGGCAGAAATTAAGGAAATGCAAAAAAATAAGGATTTGGACCCTGCATGCCAGTCAAGGGTAAGTAGTAGAATACAATGCTTGAGAAGGACACTTACAGGACCATGGTAG 1224 0.4387 MNFRNYDDNNSTWDAIHGKTPANVGSLLRQSSVYSLTFDEFQSTMEGIGKEFGSMNMDELLKNIWTAEETQALAFSAGTGEGHNHNPVSGGLQRQGFLTLPRTLSQKTVDEVWRDFIKDSGGANDGSGNGGSSIPQRQPTLGEMTLEEFLVRAGVVREDVPQQQIGKPNNNGWFGDFPRPNNNNGLLLGFQQPNRSNRNLGERVVENNNNNLAPKQPPLSLNSNHSQRPTQQQPPLFPKPSNVAFSAPMHLLNTAPHPSPARRGGLMEHSLNVGMVGLASANPEASPSRKISSDVISRSNVDNSSLSPVHYAINRGRKCSAIEKVVERRQRRMIKNRESAARSRARKQAYTFELEAEVAKLKEINRELQRKQAEIKEMQKNKDLDPACQSRVSSRIQCLRRTLTGPW* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g3003 407 SMART brlzneu 324 388 IPR004827 GO:0003700|GO:0006355
Pvu3g3003 407 MobiDBLite consensus disorder prediction 208 243 - -
Pvu3g3003 407 MobiDBLite consensus disorder prediction 117 141 - -
Pvu3g3003 407 MobiDBLite consensus disorder prediction 161 195 - -
Pvu3g3003 407 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 331 346 IPR004827 GO:0003700|GO:0006355
Pvu3g3003 407 Coils Coil 351 381 - -
Pvu3g3003 407 SUPERFAMILY Leucine zipper domain 328 377 IPR046347 GO:0003700|GO:0006355
Pvu3g3003 407 MobiDBLite consensus disorder prediction 125 140 - -
Pvu3g3003 407 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 326 377 IPR004827 GO:0003700|GO:0006355
Pvu3g3003 407 CDD bZIP_plant_BZIP46 328 382 - -
Pvu3g3003 407 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 22 407 IPR043452 GO:0003700|GO:0045893
Pvu3g3003 407 MobiDBLite consensus disorder prediction 208 232 - -
Pvu3g3003 407 Pfam bZIP transcription factor 328 381 IPR004827 GO:0003700|GO:0006355
Pvu3g3003 407 PANTHER ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 7 22 407 - -
Pvu3g3003 407 MobiDBLite consensus disorder prediction 163 195 - -
Pvu3g3003 407 Gene3D - 326 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g3003 Pvu-Chr3 51759723 51763526 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g3003 27 407 bZIP Transcription Factor Family AT1G49720 45.980 7.16e-96 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu3g3003 bZIP_1 2.5e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g3003 K14432 - gmx:100776600 608.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g3003 3 51759723 51763526 Pvu3g3003 3 51759723 51763526 ECH