Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2986 ATGGTTTTCAGTGACAATGGCAGTGCAGATACAGAAAGGAGTGAAATGTATAAAGCTCAAATGCATGTCAACAAATACGTTCTGAACTTCGTGAGCTGCATGGCTCTGAAGTATGCTACAGAGCTTGGCACAGCACACGCAATCCACAACCATGGAAAACCCATCACTCTCTCCGACTTGGCCTCACTTCTCAATCTTCACCCTTCAAGAATCGGTGTTCTCCGCCGCTTCATGCGCCTTCTAACACACAACCAATTCTTCAGGAAAACAGAAAACGGTGAAGAAGAAGAAGAAGCAACGTACGATTTGACTCTTGCATCGAAGTTTCTAGTGAGAAGCAACTCCTTCTGCTTGGCTCCTCTTGTAGAAGTAGCATTTGCTCCAAGTGTGGGGAACATGTGGAACTCCTCCAAGAAACTGTTCACAGAGGATACGGAACTTCCACTCTTCGAGAGCGTAACGGGAGAGAGTTACTGGGAATTTATGAACAGTGATTTTGAGCTGCTGAACGTGTTTCAGAAGGCTATGGCTGCTGATTCTGAAATCATCAAGCTGGGCCTCCAAGAATGCAGGCACGTGTTTGAGGGGTTGGGTTCTCTTGTGGATGTGGGAGGTGGCACTGGTGCTGTCTCCAAGCAAATCCACGAAGCCTTTCCTCACTTGAAATGCACCGTCTTTGACCAACCACAAGTGGTGGCTAACTTGACAACAACCCAGAATCTGAGCTTTGTTGGTGGTGATGTGTTTCACTCCATCCCTGCTGCTGATGCAGTTTTACTCAAGTGGGTTCTGCATGATTGGAATGATGAACTCTCCATAAAGATACTGAAGAAGTGCAGAGAAGCTATTTGTGGGAAAGGGAAAGAGGAAAAGGTGATAATCATAGACACAGTAATTGATGAAGCAGGTGATGATAGAGAATTGACAGAGTTGAAGCTGGAGTATGACTTGGTGATGCTGTCTCTCTTCAATGGAAAAGAAAGAGAAAAGAAAGAATGGGAGAAACTCATATACCAGGCTGGCTTCACCAAATGCAAGTTTAGCCCACTTTTTGGCTTCAAATCTCTCATTGAAGTTTATCCTTGA 1086 0.4503 MVFSDNGSADTERSEMYKAQMHVNKYVLNFVSCMALKYATELGTAHAIHNHGKPITLSDLASLLNLHPSRIGVLRRFMRLLTHNQFFRKTENGEEEEEATYDLTLASKFLVRSNSFCLAPLVEVAFAPSVGNMWNSSKKLFTEDTELPLFESVTGESYWEFMNSDFELLNVFQKAMAADSEIIKLGLQECRHVFEGLGSLVDVGGGTGAVSKQIHEAFPHLKCTVFDQPQVVANLTTTQNLSFVGGDVFHSIPAADAVLLKWVLHDWNDELSIKILKKCREAICGKGKEEKVIIIDTVIDEAGDDRELTELKLEYDLVMLSLFNGKEREKKEWEKLIYQAGFTKCKFSPLFGFKSLIEVYP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2986 361 PIRSF O-mtase 2 361 IPR016461 GO:0008168
Pvu3g2986 361 Gene3D Vaccinia Virus protein VP39 112 361 IPR029063 -
Pvu3g2986 361 Pfam Dimerisation domain 34 82 IPR012967 GO:0046983
Pvu3g2986 361 Gene3D - 6 110 IPR036388 -
Pvu3g2986 361 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 9 361 - -
Pvu3g2986 361 SUPERFAMILY "Winged helix" DNA-binding domain 14 114 IPR036390 -
Pvu3g2986 361 Pfam O-methyltransferase domain 143 342 IPR001077 GO:0008171
Pvu3g2986 361 PANTHER O-METHYLTRANSFERASE 9 361 IPR016461 GO:0008168
Pvu3g2986 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 361 IPR016461 GO:0008168
Pvu3g2986 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 116 360 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2986 Pvu-Chr3 51587104 51588692 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2986 28 361 Monolignol Biosynthesis Gene Families AT1G51990 32.277 2.25e-44 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2986 K22588 K13259 gmx:106795493 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2986 3 51587104 51588692 Pvu3g2986 3 51587104 51588692 ECH
Pvu6g1879 6 29041136 29042513 Pvu3g2986 3 51587104 51588692 ECH