Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2985 ATGGTTTTCACCAACAATGGCAATGCAGATAGAGATAAGAGAGAAATGTACAAAGCTCAAATGCACGTGCACAAACATATTCTGAACTTCCTAAGCTGCATGGCTCTGAAGTATGCTACAGAGCTTGGCATAGCAGACGCAATCCACAACCATGGAAAACCCATCACTCTCTCCGACTTGGCCTCACTTCTCAATCTTCACCCTTCAAGAATCGGTGTTTTCCGCCGCTTCATGCGCCTCCTAACACACAACCAGTTCTTCACGAAAACAGAAAACGGCGAAGAAGAAGAAGAAGCAACGTACGATTTGACTCTTGCATCGGAGTTTCTAGTGAGAAGCAACTCATTCAGCTTGGCACATCTCGTTGAAGTGGCATTTCTACCAAGAGTGTGTAACATGTGGAACTCCTCCAAGAAACTGTTCGAAGAGGATACGGAACTTCCGCTGTTCGAGAGCGTAACCGGAGAGAGATACTGGGACTTCATCAACAATGATTGTGAGTTGCTGAATGTGTTTCAGAAGGCTATGGCTGCTGATTCTGAAATCGTAAAGCTGGGACTCCAAGAATGCAAGCACGTGTTTGAGGGGTTGGGTTCTCTTGTGGATGTGGGAGGTGGGACTGGTGCTGTTTCCAAGCTCATACTCCAATCCTTTCCTCACTTGAAATGCACCGTCTTGGACCAACCACAAGTGGTGGCTAACTTGAAAACAACCCAGAATCTGAGCTTTGTTGGTGGTGATATGTTCCAGTCCATCCCTTCTGCTGATGCAGTTTTACTCAAGTTGGTTCTGCATGATTGGAATGATGAACTCTCCATAAAGATATTGAAGAAGTGCAAAGAAGCTATTTGTGGGAGAGGAAAGGAGGGAAAGGTGATAATCATAGACATAGTAATTGATGAAGGAGGTGATGATAGAGAATTGACAGAGTTGAAGCTGGAGTATGACTTGGTGATGCTGTCTCTCTTCAATGGAAAAGAAAGAGAAAAAAAAGAATGGGAGAAACTCATATACCAAGCTGGCTTCACCACCTGCAAGTTTAGCCCACTATTTGGCTTCAAATCTCTCATTGAAGTTTATCCTTGA 1086 0.4429 MVFTNNGNADRDKREMYKAQMHVHKHILNFLSCMALKYATELGIADAIHNHGKPITLSDLASLLNLHPSRIGVFRRFMRLLTHNQFFTKTENGEEEEEATYDLTLASEFLVRSNSFSLAHLVEVAFLPRVCNMWNSSKKLFEEDTELPLFESVTGERYWDFINNDCELLNVFQKAMAADSEIVKLGLQECKHVFEGLGSLVDVGGGTGAVSKLILQSFPHLKCTVLDQPQVVANLKTTQNLSFVGGDMFQSIPSADAVLLKLVLHDWNDELSIKILKKCKEAICGRGKEGKVIIIDIVIDEGGDDRELTELKLEYDLVMLSLFNGKEREKKEWEKLIYQAGFTTCKFSPLFGFKSLIEVYP* 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2985 361 PANTHER ISOFLAVONE 4'-O-METHYLTRANSFERASE 10 361 - -
Pvu3g2985 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
Pvu3g2985 361 CDD AdoMet_MTases 200 288 - -
Pvu3g2985 361 Pfam O-methyltransferase domain 143 342 IPR001077 GO:0008171
Pvu3g2985 361 Pfam Dimerisation domain 34 82 IPR012967 GO:0046983
Pvu3g2985 361 PANTHER O-METHYLTRANSFERASE 10 361 IPR016461 GO:0008168
Pvu3g2985 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 360 IPR029063 -
Pvu3g2985 361 Gene3D - 5 110 IPR036388 -
Pvu3g2985 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 24 361 IPR016461 GO:0008168
Pvu3g2985 361 Gene3D Vaccinia Virus protein VP39 112 361 IPR029063 -
Pvu3g2985 361 SUPERFAMILY "Winged helix" DNA-binding domain 14 114 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2985 Pvu-Chr3 51581758 51584253 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2985 34 346 Monolignol Biosynthesis Gene Families AT5G54160 32.110 6.10e-42 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2985 K22588 K13259 gmx:100807589 465.307