Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2978 ATGAAGGAAAAACCAGACACAGACAACCACGCAACATCGGAGGGAACCAGCGACTCCGACACCCTCGCTCTGCTTCGCCCTGCTCTTTCCCTTCTCAACCGTCGCACTTTCACCGCCTGTCGCGACTTCACTCGCAAGATCGCCAGATCCGAACCCAACGCCTCTCTCCAAATCGAACAAATCCTCGCGGTTGCCGACGTTCTCGCCGCCGCAGAGCGCCGCCACGACCCTCTCGACTGGTACTCCATCCTGCGCCTCAGTCCCGGCGACGCCGCCGCGGACCGCGACCTCGTACGGCAACAGTTCAAGACCCTAGTGCGTCTCCTTGACCCTAACAAGAACAAGTTTCCCTTCGCCGACGAGGCCCTCATGCGCGTGCGCGAAGCCTGGCGTGTTCTCTCTGACCCCGCACTCAAGGCCAGTTTTGACAGCAAGGTTCAAGACGCCGCCGCTTCTTCGTTCTGGACAATGTGCCCCTACTGCTGGTACCTCCACGAATACCAGAGCTGCTACGAGGATTGCACGCTGAGGTGCGCCAATTGCCAGAAGACGTTTCACGGCGCGGCGGTGAAGCCCCCTCCACCGGAGTCGGTGGTGGCGGGGAAGGAGGAGTACTACTGTTACCACGTGAGTTTGCCGCTTAGATACCCTGTTGGTGAACAGGGTAGTTTTGGTTATGAGGAAAATGGGATGCGAAAGAGATTTAGGGTTAAAACAGTGGCTAATAGGAGTAGAAGGAAAGGGTTTGTTCATGTTCATGCTCTCTCTGATTCGGACGACGCCGAGGAGAAAAGATGA 798 0.5727 MKEKPDTDNHATSEGTSDSDTLALLRPALSLLNRRTFTACRDFTRKIARSEPNASLQIEQILAVADVLAAAERRHDPLDWYSILRLSPGDAAADRDLVRQQFKTLVRLLDPNKNKFPFADEALMRVREAWRVLSDPALKASFDSKVQDAAASSFWTMCPYCWYLHEYQSCYEDCTLRCANCQKTFHGAAVKPPPPESVVAGKEEYYCYHVSLPLRYPVGEQGSFGYEENGMRKRFRVKTVANRSRRKGFVHVHALSDSDDAEEKR* 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2978 265 CDD DnaJ 79 135 IPR001623 -
Pvu3g2978 265 SUPERFAMILY Chaperone J-domain 74 145 IPR036869 -
Pvu3g2978 265 ProSiteProfiles dnaJ domain profile. 79 146 IPR001623 -
Pvu3g2978 265 SMART dnaj_3 78 138 IPR001623 -
Pvu3g2978 265 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 11 259 - -
Pvu3g2978 265 Gene3D DnaJ domain 72 154 IPR036869 -
Pvu3g2978 265 Pfam DnaJ domain 79 143 IPR001623 -
Pvu3g2978 265 PANTHER CHAPERONE DNAJ-DOMAIN PROTEIN 11 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2978 Pvu-Chr3 51516170 51517240 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2978 24 231 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 36.364 2.86e-42 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2978 - - pvu:PHAVU_003G289300g 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1523 2 28622289 28623505 Pvu3g2978 3 51516170 51517240 PCT