Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2968 ATGGAGAAATTAGATAAAAAGGGAAAAGAGATGAAAGAAAAGAAATGGACCCGGAAACTGGAGTTACCGTCAATAATGGGGAACCCCAAGAAGGAGGTTGCGTGTGACGACGACGTATTGGGGTCTCCGAGGGATGTCTTTGGGGTTCCCGTTTCGGGGACGGATTCGGACAGCACGGGGAGCGGCAACTGCGGCGCGCTTGGGTCGCCCATAACGGGCCCGAATCGGGGACAAGGGAGAGACGCGCAGAACCAGCAATGGAAGACGATGATGGACGTGTTGAGGTTCAAGTCCGTTAGAAGATTCTCGACGATTCCTCTGCTCGGGGCGAGTTACGAGATCTCGCGCCGGAGCCTGAGGAACAAGTTGGCGCGTATTCGACCCGCCAATGACGACGATGATTTAGATGTCTCCATTGACTTTGACGGCATTCCCACCAAGCCTTCTTGGAAGAACTTCAATTACGCTGAACTCGTCGCTGCAACCGACGATTTCAACCCTGAGAACATGCTGGGAAAAGGTGGTCATGCTGAAGTGTACAAAGGATGCCTACCAGATGGTCGAATTGTAGCAGTTAAGAGGTTAATGAGGAATGAAAAGGAAATTGAGGACACAGTTGGTGATTTCTTGACAGAGCTTGGAATCATTGCTCACATTAACAACCCCAATGCAACACGCTTGATAGGGTTTGGGATCGACCAAGGTCTCTTTTTTGTTCTACAATTGGCTCCACATGGCAGCCTTGCCTCTATGCTCTTTGGACCTGAATGTCTAGAGTGGAATATAAGGTTTAAAGTAGCTGTTGGGGTAGCAAAAGGATTGCACTATCTCCACCACGATTGCCCAAGAAGAATCATTCACAGAGACATCAAAGCCTCAAATATATTACTCAACCACAGTAATGAAGCTGAGATTTCAGACTTTGGATTAGCAAAGTGGCTCCCAGATAAGTGGGCTCACCACGTTGTCTTCCCAATAGAAGGCACGTTCGGATATTTAGCTCCGGAGTACTTTATGCATGGAATAGTGGATGAGAAGATTGATGTTTTTGCATTTGGGGTTTTGTTACTCGAGCTCATAACAGGTCGTCGTGCAGTTGATTCAAATAGTAGGGAAAGTCTTGTGATCTGGGCCAAACCATTTCTGGATGCAAAGTTGATCAAAGAAATGGTAGACCCCAGATTAGGAGACAAGTATGATCTGGCAGAAATGAAGTGTTGCATGGCAACGGCTTCCTTGTGTATCCATCACATGTCCTCCAAGAGGCCATACATGGATCAGGTTGTGCAGCTACTGAAAGGAGAAGAGGTGCCAATAGAACTGAACCAAAATTCACCTAGTCCAAGATCACTGTTGGTAGATGCATGTGACCTGGAAGATTACACTTGCTCAAACTATTTGAACGACCTGAATCGGCACAGGCAATTACTGATGGAGTGA 1440 0.4715 MEKLDKKGKEMKEKKWTRKLELPSIMGNPKKEVACDDDVLGSPRDVFGVPVSGTDSDSTGSGNCGALGSPITGPNRGQGRDAQNQQWKTMMDVLRFKSVRRFSTIPLLGASYEISRRSLRNKLARIRPANDDDDLDVSIDFDGIPTKPSWKNFNYAELVAATDDFNPENMLGKGGHAEVYKGCLPDGRIVAVKRLMRNEKEIEDTVGDFLTELGIIAHINNPNATRLIGFGIDQGLFFVLQLAPHGSLASMLFGPECLEWNIRFKVAVGVAKGLHYLHHDCPRRIIHRDIKASNILLNHSNEAEISDFGLAKWLPDKWAHHVVFPIEGTFGYLAPEYFMHGIVDEKIDVFAFGVLLLELITGRRAVDSNSRESLVIWAKPFLDAKLIKEMVDPRLGDKYDLAEMKCCMATASLCIHHMSSKRPYMDQVVQLLKGEEVPIELNQNSPSPRSLLVDACDLEDYTCSNYLNDLNRHRQLLME* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2968 479 MobiDBLite consensus disorder prediction 52 68 - -
Pvu3g2968 479 MobiDBLite consensus disorder prediction 1 37 - -
Pvu3g2968 479 Gene3D Transferase(Phosphotransferase) domain 1 244 445 - -
Pvu3g2968 479 PANTHER OS08G0249100 PROTEIN 1 479 - -
Pvu3g2968 479 SUPERFAMILY Protein kinase-like (PK-like) 150 453 IPR011009 -
Pvu3g2968 479 MobiDBLite consensus disorder prediction 1 20 - -
Pvu3g2968 479 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 1 479 - -
Pvu3g2968 479 SMART serkin_6 165 476 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2968 479 Pfam Protein kinase domain 168 429 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2968 479 ProSiteProfiles Protein kinase domain profile. 165 437 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2968 479 MobiDBLite consensus disorder prediction 51 84 - -
Pvu3g2968 479 ProSitePatterns Protein kinases ATP-binding region signature. 171 193 IPR017441 GO:0005524
Pvu3g2968 479 Gene3D Phosphorylase Kinase; domain 1 139 240 - -
Pvu3g2968 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2968 Pvu-Chr3 51439878 51442962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2968 125 432 Trihelix Transcription Factor Family AT5G38560 42.006 2.47e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Pvu3g2968 Pkinase 1.3e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2968 - - gmx:100794225 768.074
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1508 2 28352172 28357010 Pvu3g2968 3 51439878 51442962 PCT