Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2956 ATGCATATAGCTCGCTATATTCTTGGTTTCAACACCATCAAACTCTTGTTCTTTGCCATGGCTTTCTTCACCTCTTCTTCATGCAGTAATCAAACCCAAAAACAAACACCTTTCTTCATATGTATCTTCATCTTCTTCACTCTGTTCCATAACACTGTTGAGTCCGTTTCCTTCAACTTTTCCAGCTTCCAGCAGTCAAACTTGAACAACCAAATAGACTTCGCGGGTGATGCTTTTCCCTCAAACGGTGTTCTTCAGCTCACGAAGAACCAACTCGATGGCCCCGTCACAGACAGCGTTGGTCGAGCCTCGTATTCACAACCAGTGAGGCTTTGGGATCAAAAAACAAAGAAGCTCACCGATTTCACAACCCATTTCTCTTTTGTCATAAAAGCTGTGAACGAGTCAATTGTTGGTGATGGCTTGGCCTTCTTCCTTGCACCGTTTGATTCTTCCATTCCCAACAACTCTGCTGGTGGGTTCCTTGGCCTGTTCAGCCCGGATTCTGCATTCGACACTAAGAAAAATCAGTTGGTGGCAGTTGAGTTCGACAGTTTCAAGAACGAATGGGATCCGAGCTCAGATCACGTAGGGATCAATGTAAATTCCATTCAATCAGTTGCAAACGTGAGTTGGAGGAGCAGCATTAAGAATGGGTCTGTTGCTAATGCTTGGGTATGGTACAACTCCACATCCAAAAATCTCTCTGTTTTTCTTACATATGCTGAGAATCCAACCTTCAATGGCAGTTCTAGTGTTTCTTACGTTATTGATTTCAGGGACGTATTGCCAGAGTTTGTTAGAATAGGGTTTTCTGCTGCAACGGGTACATGGGTTGAGATACACAACATTTTGCTTTGGTCATTCAGTTCAACCTTGGATGGGGATGGTAGGAAAAAATCCAAGGTTGGCTTAGTGGTTGGTATCAGTGTTGGTTTGGGTTGTTTAGTTGGTCTTGTGGGTCTATTATGGTTTACCTTCTGGAGAAGGAGAAATAGACTAAGGGGTGTAAGCGAGGACATCATTGATGTTGATGCTTCTATAGATGATGAGTTTGAGAGAGGGACTGGTCCAAAGAGGTTCAGCTACCGGGAACTAAGCAACGCAACCAACAACTTTGCTGAAGAAGGGAAACTAGGACAAGGAGGGTTTGGAGGAGTTTACAAAGGTTTGATAGTGAATTCCAACCTTGAAGTGGCAGTGAAGAGGGTTTCCAAAGGGTCAAAGCAAGGGAAAAAGGAGTACATATCAGAAGTGAGAGTTATCAGCCGTCTGAGACACAGAAACCTGGTTCAACTCTTAGGGTGGTGCCATGAACAGAGTGAGCTCCTTCTTGTTTATGAATTCATGCCTAATGGAAGCCTTGATTCTCATCTTTTTGGAAATAGAGTCATGCTTTCTTGGGTGGTGAGATACAAGGTGGCCTTAGGTTTGGCATCTGCCCTTCTTTATCTTCATGAAGAGTGGGAACAGTGTGTGGTCCATAGAGATATTAAGTCAAGTAATATAATGTTGGATGCTAATTTCAATGCCAAACTTGGTGACTTTGGTCTTGCAAGGCTGGTAGACCATGAGGTAGGTTCACAAACCACTGTTTTGGCAGGCACCATGGGGTACCTAGCCCCTGAGTGTGTGACCACAGGGAAATCAAGCAAGGAATCTGATGTGTACAGCTTTGGTGTTGTGGCACTTGAGATCACATGTGGTAGAAAACCAGTTGAGGTGAGAGAAGAGCCTGGTAAAGTTAGGCTTGTGGAGTGGGTGTGGAACCTCTATGGAAAAGGGAAACTACTAGAAGCAGCTGATGAGAAATTGAACTTGGAATTTGAAGAGCAGCAAATGGAATGCTTGATGGTTGTGGGGTTGTGGTGTTGTCACCCTGATCATACCATGAGGCCCTCCATTAGGCAAGTAATAAGTGTGCTTAACTTTGAAGCCCCTTTGCCAAGTCTTCCATCCAAGTTGCCAGTGCCAATGTACTTTGCACCTCCCATTGATATAAGCCAATTCTCCTACACTTCATCTCTCGTCACAGGCACAACCAAAGAATCGTCCACATACTCGTCAATGTCTACAGGGTCTGGAAACTCTCCACTATTGCAATGA 2106 0.4425 MHIARYILGFNTIKLLFFAMAFFTSSSCSNQTQKQTPFFICIFIFFTLFHNTVESVSFNFSSFQQSNLNNQIDFAGDAFPSNGVLQLTKNQLDGPVTDSVGRASYSQPVRLWDQKTKKLTDFTTHFSFVIKAVNESIVGDGLAFFLAPFDSSIPNNSAGGFLGLFSPDSAFDTKKNQLVAVEFDSFKNEWDPSSDHVGINVNSIQSVANVSWRSSIKNGSVANAWVWYNSTSKNLSVFLTYAENPTFNGSSSVSYVIDFRDVLPEFVRIGFSAATGTWVEIHNILLWSFSSTLDGDGRKKSKVGLVVGISVGLGCLVGLVGLLWFTFWRRRNRLRGVSEDIIDVDASIDDEFERGTGPKRFSYRELSNATNNFAEEGKLGQGGFGGVYKGLIVNSNLEVAVKRVSKGSKQGKKEYISEVRVISRLRHRNLVQLLGWCHEQSELLLVYEFMPNGSLDSHLFGNRVMLSWVVRYKVALGLASALLYLHEEWEQCVVHRDIKSSNIMLDANFNAKLGDFGLARLVDHEVGSQTTVLAGTMGYLAPECVTTGKSSKESDVYSFGVVALEITCGRKPVEVREEPGKVRLVEWVWNLYGKGKLLEAADEKLNLEFEEQQMECLMVVGLWCCHPDHTMRPSIRQVISVLNFEAPLPSLPSKLPVPMYFAPPIDISQFSYTSSLVTGTTKESSTYSSMSTGSGNSPLLQ* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2956 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 493 505 IPR008271 GO:0004672|GO:0006468
Pvu3g2956 701 PANTHER - 43 674 - -
Pvu3g2956 701 ProSitePatterns Protein kinases ATP-binding region signature. 379 402 IPR017441 GO:0005524
Pvu3g2956 701 SUPERFAMILY Protein kinase-like (PK-like) 357 673 IPR011009 -
Pvu3g2956 701 CDD STKc_IRAK 387 643 - -
Pvu3g2956 701 ProSiteProfiles Protein kinase domain profile. 373 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2956 701 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Pvu3g2956 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 54 294 IPR013320 -
Pvu3g2956 701 SMART serkin_6 373 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2956 701 ProSitePatterns Legume lectins alpha-chain signature. 263 272 IPR000985 -
Pvu3g2956 701 Pfam Legume lectin domain 56 297 IPR001220 GO:0030246
Pvu3g2956 701 Gene3D Transferase(Phosphotransferase) domain 1 450 663 - -
Pvu3g2956 701 CDD lectin_legume_LecRK_Arcelin_ConA 56 293 IPR001220 GO:0030246
Pvu3g2956 701 Pfam Protein kinase domain 374 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2956 701 ProSitePatterns Legume lectins beta-chain signature. 179 185 IPR019825 -
Pvu3g2956 701 Gene3D - 53 306 - -
Pvu3g2956 701 PANTHER RECEPTOR LECTIN KINASE 43 674 - -
Pvu3g2956 701 Gene3D Phosphorylase Kinase; domain 1 358 449 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2956 Pvu-Chr3 51301949 51304411 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2956 42 660 Receptor kinase-like Gene Family AT5G10530 52.113 0.0 606
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu3g2956 Pkinase 4.3e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2956 - - pvu:PHAVU_003G287100g 1316.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1488 2 28044630 28045472 Pvu3g2956 3 51301949 51304411 PCT