Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2955 ATGGCCATGAACTCGAGAACTCAAATATCTGTTTTCACTATCATCATTTCCTTCCTTGGACTCACCCAAAACGTGAAGTCAGCTTCTTTCTCATTCTCCAGTTTTGGGTCTTACACAAATGGCATTACCCTGGAAGGTGATGCCTATGTTTCAGAAGGGGTGATAAAGCTGACACCTGTCACACCCAACAACGCTGGCAGAGCCTCCTTTGCTGCACCCATCCACCTTTGGGATCCCGAAACTGGGAAGCTCGCAGCCTTCACCACAACCTTCTCCTTTGTTGTTGCGCCAAACGCTCCTGGGCTCTTGGCAGACGGCATTGCCTTCTTCCTGGCTCCGTTCAACTCGAACATCCCAAGCAATTCAAGTGGTGGATTCCTTGGACTTTTCAGCCCTGAGTCTGCCCTAAACGTATACCAGAATGAAATAGTGGCTGTGGAATTTGACTCCTTCAGTGGGAACCCCTGGGACCCTCCCTCTGCCCATGTAGGCATTGATGTTAACTCCATTGCCTCCGTCACAACGGAGAAATGGGAAACTGACAGTGCAGGGAACGCGCTTGTTGCATACGCCAGTGTGAGCTATGAGGCTGTGGAGAAACGTTTAGACGTGGTTGTGAGATACCCTGGAAGCAGTGTGAATGAGACTAGTCTCTCTTTTGTGATTGATTTGAGGACTGTTCTTCCACAATGGGTTAGGGTTGGATTCTCCGGTGCCACGGGACGACTGGTTGAAATACACAACATTCTTTCTTGGACCTTCAATTCTGCGTTCTATTAG 780 0.491 MAMNSRTQISVFTIIISFLGLTQNVKSASFSFSSFGSYTNGITLEGDAYVSEGVIKLTPVTPNNAGRASFAAPIHLWDPETGKLAAFTTTFSFVVAPNAPGLLADGIAFFLAPFNSNIPSNSSGGFLGLFSPESALNVYQNEIVAVEFDSFSGNPWDPPSAHVGIDVNSIASVTTEKWETDSAGNALVAYASVSYEAVEKRLDVVVRYPGSSVNETSLSFVIDLRTVLPQWVRVGFSGATGRLVEIHNILSWTFNSAFY* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2955 259 PIRSF Plant_L_lectin 2 259 IPR016363 GO:0030246
Pvu3g2955 259 ProSitePatterns Legume lectins alpha-chain signature. 228 237 IPR000985 -
Pvu3g2955 259 PANTHER LECTIN 4 257 - -
Pvu3g2955 259 SUPERFAMILY Concanavalin A-like lectins/glucanases 27 258 IPR013320 -
Pvu3g2955 259 Pfam Legume lectin domain 28 256 IPR001220 GO:0030246
Pvu3g2955 259 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 4 257 - -
Pvu3g2955 259 CDD lectin_legume_LecRK_Arcelin_ConA 42 256 IPR001220 GO:0030246
Pvu3g2955 259 ProSitePatterns Legume lectins beta-chain signature. 144 150 IPR019825 -
Pvu3g2955 259 Gene3D - 25 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2955 Pvu-Chr3 51294378 51295157 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2955 14 258 Receptor kinase-like Gene Family AT5G10530 36.187 2.02e-35 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2955 - - gmx:100785697 387.111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1487 2 28042759 28043550 Pvu3g2955 3 51294378 51295157 PCT
Pvu3g2955 3 51294378 51295157 Pvu2g1488 2 28044630 28045472 PCT