Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2939 ATGGGAGACGTGGCTAAGGACCTTGCAGCTGGGACTATTGGAGGGGCAGCACAGTTGATATGTGGACACCCCTTTGACACTATCAAGGTCAAGCTCCAAAGCCAGCCCGTACCACTCCCTGGTCAGCTTCCCAAGTATTCAGGTGCATTTGATGCTGTCAAGCAGACAGTAGCATTAGAAGGGCCAAGAGGTTTATACAAAGGTATGGGTGTTCCTCTTGCTACAGTAGCAGCTTTCAATGCAGTCCTGTTTACAGTGAGGGGACAGATGGAAACATTAGTGAGGTCCAATCCTGGCGTCCCCCTGACAGTGAATCAGCAATTTGTCTGTGGAGCTGGAGCTGGAGTTGCAGTTTCCATTCTTGCATGCCCAACTGAATTGATCAAATGCAGGTTGCAAGCACAAAGTGCGCTAGCTGGCTCTGAAACAGCTACTGTGGCTGTTAAGTACGGAGGACCCATGGATGTGGCCAGGCATGTTCTCAAATCAGAAGGGGGCACGAGAGGTCTTTTCAAGGGCTTGGTCCCCACTATGGCCCGAGAGATACCAGGAAATGCTATAATGTTTGGTGTATACGAAGCATTAAAGCGAAAGTTTGCAGGGAGCACTGATACTTCTGGCCTGAGTAGAGGTTCTCTGATTGTTGCTGGAGGCTTGGCTGGAGCTTCTTTCTGGTTCATTGTTTACCCAACTGATGTTATTAAGAGTGTGATTCAAGTAGATGACTACAGAAATCCAAAATTTTCTGGTTCATTTGATGCATTCAGAAAGATTAAAGCTTCACAGGGCTTCAAGGGCTTGTATAAGGGTTTTGGTCCTGCTATGGCCCGAAGTATTCCTGCAAATGCAGCATGCTTCTTGGCATATGAGATGACAAAATCAGCTCTGGCATGA 894 0.4754 MGDVAKDLAAGTIGGAAQLICGHPFDTIKVKLQSQPVPLPGQLPKYSGAFDAVKQTVALEGPRGLYKGMGVPLATVAAFNAVLFTVRGQMETLVRSNPGVPLTVNQQFVCGAGAGVAVSILACPTELIKCRLQAQSALAGSETATVAVKYGGPMDVARHVLKSEGGTRGLFKGLVPTMAREIPGNAIMFGVYEALKRKFAGSTDTSGLSRGSLIVAGGLAGASFWFIVYPTDVIKSVIQVDDYRNPKFSGSFDAFRKIKASQGFKGLYKGFGPAMARSIPANAACFLAYEMTKSALA* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2939 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 208 295 IPR018108 -
Pvu3g2939 297 Pfam Mitochondrial carrier protein 214 296 IPR018108 -
Pvu3g2939 297 Pfam Mitochondrial carrier protein 4 95 IPR018108 -
Pvu3g2939 297 Pfam Mitochondrial carrier protein 103 200 IPR018108 -
Pvu3g2939 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 2 93 IPR018108 -
Pvu3g2939 297 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 198 IPR018108 -
Pvu3g2939 297 SUPERFAMILY Mitochondrial carrier 3 290 IPR023395 -
Pvu3g2939 297 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 1 296 - -
Pvu3g2939 297 Gene3D Mitochondrial carrier domain 2 297 IPR023395 -
Pvu3g2939 297 PANTHER CARNITINE/ACYLCARNITINE CARRIER-LIKE PROTEIN 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2939 Pvu-Chr3 51154700 51157621 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2939 22 296 Antiporters AT1G79900 32.740 3.52e-41 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2939 K15109 - gmx:100791908 559.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2939 3 51154700 51157621 Pvu3g2939 3 51154700 51157621 ECH