Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2931 GCAACACACTCTCCCCCACTTCCTCAAATTCACCACAGCACACTTCACTTCTTCAAAAGCACCTCCTTCAAGCTGGCGTTCCAAAACCAAACCATCACTGTCCGAGAAATCAAGCCCAAGAACCGCAGAATCATGGGTTCTGGAGGCCCTGATGACGCGGACAACCGGTGGCCACCGTGGCTGAAGCCTCTGCTCAAAGAGAGCTTCTTTGTTCAATGCAAGTTGCACGCTGATTCGCACAAGAGCGAGTGCAACATGTACTGCTTGGATTGTATGAACGGCGCACTCTGCTCCCTCTGCCTCGGTTACCACAAAGATCACCGTGCTATTCAGATAAGAAGGTCCTCATACCATGATGTGATTAGGGTGAACGAGATTCAGAAGGTTTTGGACATTACAGGGGTCCAAACCTACATTATCAACAGTGCAAGGGTTGTTTTCTTGAATGAGAGGCCTCAGCCAAGGCCTGGTAAAGGAGTCACCAACACTTGTGAAGTCTGTGAGCGTAGCCTTCTTGATTCATACCGTTTCTGTTCTCTTGGTTGCAAGATTGTGGGGACTTCAAGGAACTTCGAGAAGAAGAAAAAGTCAACAACAATGGCATCAGACTCAGAGGATTCATACAGCAGCAACAGCAGCCATGGGAAGAACAACAGCAACAAGGTGCAGAGTTTCACACCGTCCACCCCACCACCAACTTCGGTTAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCACACCGTGCCCCAATGGGAGGACTAGTGATAGAATACTAG 780 0.4885 ATHSPPLPQIHHSTLHFFKSTSFKLAFQNQTITVREIKPKNRRIMGSGGPDDADNRWPPWLKPLLKESFFVQCKLHADSHKSECNMYCLDCMNGALCSLCLGYHKDHRAIQIRRSSYHDVIRVNEIQKVLDITGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCERSLLDSYRFCSLGCKIVGTSRNFEKKKKSTTMASDSEDSYSSNSSHGKNNSNKVQSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLVIEY* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2931 259 MobiDBLite consensus disorder prediction 202 236 - -
Pvu3g2931 259 MobiDBLite consensus disorder prediction 193 259 - -
Pvu3g2931 259 Pfam PLATZ transcription factor 113 184 IPR006734 -
Pvu3g2931 259 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 33 255 - -
Pvu3g2931 259 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 33 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2931 Pvu-Chr3 51096112 51098333 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Pvu3g2931 PLATZ 8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2931 - - vra:106774881 467.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2931 3 51096112 51098333 Pvu3g2931 3 51096112 51098333 ECH
Pvu2g1449 2 27475937 27478512 Pvu3g2931 3 51096112 51098333 PCT