Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2922 ATGTCAGATGGGAGAGAGAAGGAACGAAAGGTTCCTCTTCTGAAGCTGTTCTCCTTTGCTGATTGGTACGACTGCGTTTTGATGGGTGTTGGATCTGTTGGGGCGTGTGTTCATGGTGCCTCTGTGCCTGTTTTCTTTGTCTTCTTCGGAAAGATTATCAATGTTATAGGCTTCGCTTACCTTTCTCCTAAAGAAGCTTCCCACGAAGTTGCTAAGTACGCATTGGATTTTGTGTATCTAAGCATAGTAATATTGTTTTCATCTTGGACAGAGGTGGCTTGTTGGATGCATACTGGGGAACGTCAAGCTGCAAAGATGAGAATGGCATACTTAAGGTCAATGATGAATCAAGATATAACTCTTTTTGATACTCAAGCTTCAACTGGAGAGGTTATTTCTTCTATTACCACTGACATCATCGTTGTTCAAGATGCACTCTCTGAGAAGGTTGGGAATTTCATGCACTACATAAGCCGTTTCATAGGTGGTTTTGTCATTGGTTTTGTGAGAGTGTGGCAGATAAGTTTAGTGACACTTGCCATTGTGCCCTTAATTGCTATTGCTGGTGGCCTTTACGCTTATGTCACCATTGGCCTTATTGGAAAAGTTCGAAAAGCATATGTCAGAGCTGGTGAAATTGCTGAGGAGGTGATAGGCAATGTGAGAACGGTACAAGCATTTGCAGGAGAAGAAAGAGCAGTGAGATCATACAAAGCAGCTCTGATGAAGACATATAGAAATGGTCGAAAAGCAGGTTTAGCTAAGGGTCTGGGATTAGGCTCCATGCATTGTGTTCTTTTCCTTTCATGGGCTCTCCTTGTTTGGTTCAATAGCATAGTTGTTCACAAGAATATCGCCAATGGTGGCGATGCTTTCACTACAATGCTCAATGTGGTCATTTCTGGCCTGTCACTTGGTCAGGCAGCACCTGATATTTCTGCATTTATCAGGGCAAAGGCTTCAGCTTATCCCATTTTTGAGATGATAGAGAGGGACACCATGAACAAAGTCAGCTCAGAAAATGGTCAAAAGTTAAGCAAATTGGAAGGTCACATCCAATTTAAGGATGTCTGTTTTAGTTATCCATCTCGTCCTGATGTGGTTATCTTCAACAACTTTTGTCTTGAGATTCCTCCAGGGAAAATTGTAGCTCTTGTGGGAGGAAGTGGTTCTGGAAAAAGCACAGTTATATCATTGATTGAGCGCTTCTATGAACCAGTTTCTGGTCAAATACTATTAGATGGGAACACCATCAGGGAACTTGATCTCAAATGGCTAAGGCAACGAATTGGGCTGGTTAATCAAGAGCCTGCACTTTTTGCTACAAGCATCAGGGAGAACATACTGTACGGAAAAGATGATGCCACTCTTGAAGAAATAAATCAAGCTGTGATGCTCTCTGATGCTCAGTCTTTCATTAACAATCTTCCTGATGGTTTAGATACTCAGGTTGGTGAGAGAGGGATACAACTATCTGGGGGACAGAAACAGAGGATTGCAATATCTCGTGCCATTGTTAAGAATCCATCAATCCTCTTATTAGATGAAGCAACCAGTGCTCTGGATGCAGAGTCTGAGAAAAGTGTACAGGAGGCTCTTGATCGTGTCATGGTTGGTAGAACAACCGTGATAGTTGCACACAGACTTTCTACCATTAGGAATGCAGATATGATCGTTGTTATTGAGGGAGGGAAGGTGGTGGAAATTGGCAATCACGAGGAACTCATTTCCAACCCAAATAATGTATATGCATCTCTTGTTCAAATCCAAGAAACAGCCTTTTCTCAAGGCCATCTTTCTGTTGATCCTTTCTTGGGAGGCTCATCAAGGCGCCTAGGAGAGTCATCATCTTGCACAACAAGCTTTCGTGGTAGTTTTCGCTCAGACAAAGAATCTACTAGTCGGGCTTTTGGTGATAGAGTAGAAAGTGTTGGAACTTCAAGGCATGTATCAGTAAAAAGACTATATTCCATGATTGGTCCTGATTGGCCTTATGGTGTTTTTGGAACCTTGGGTGCGTTTATTGCTGGAGCACAAATGCCACTCTTTGCTCTTGGAATCTCTCATGCTCTTGTATCTTATTACATGGATTGGGACACAACACGTCATGAAGTGAAAAAAGTTGCTTTCCTCTTCTGTGGGGCAGCAGTTCTAACCATCACTGCCCATGCCATTGAACATCTTTCCTTTGGAATCATGGGGGAACGACTTACCCTTCGGGCAAGAGAAAAAATGTTTTCAGCTATTTTAAAGAGTGAAATTAGTTGGTTTGATGACATAAACAACACAAGTTCTATGCTTTCATCACGCTTAGAGACCGATGCAACATTTTTAAGAACTATAATTGTTGATCGTTCAACGATTCTTCTGCAAAATGTTGGTCTGGTTGTTACTTCATTTATTGTTGCCTTCATGTTGAACTGGAGGATAACGCTTGTTGTACTGGCCACGTACCCTTTGATCATTAGCGGTCACATAAGCGAGAAACTATTCATGCAAGGCTTTGGTGGCAACTTGAGCAAAGCATATCTAAAAGCCAACATGTTGGCTGGGGAGGCTGTGAGTAATATCCGCACTGTGGCTGCATTTTGTGCTGAACAAAAGGTCCTTGACCTTTATGCTAATGAGCTTGTGGAGCCTTCAAAGCGTTCATTCAATCGAGGTCAAATTGCTGGCATATTCTATGGCATTTCCCAGTTCTTTATTTTCTCATCTTATGGCCTTGCCTTGTGGTATGGGTCTGTGTTGATGGAAAAAGAGATTTCTAGCTTCAAATCAATTATGAAGTCGTTTATGGTTTTAATTGTAACAGCACTAGCTATGGGGGAGACATTGGCTCTGGCACCTGACCTTTTGAAAGGAAATCAAATGGTTGCATCCATTTTTGAAGTGATGGATAGAAAGACAGGAATATTGGGTGATATTGGAGAAGAGTTGAAGACAGTGGAAGGAACAATTGAATTAAAAGGAATCCGTTTCAACTATCCTTCAAGGCCAGAAGTGGTTATTTTCAATAATTTCAATCTTAAAGTGCCTGCAGGAAAGAATATTGCCTTGGTGGGGCACAGTGGATGTGGTAAAAGTTCAGTCATCTCCCTTATACTCAGATTTTATGATCCAACATTTGGGAAGGTGATGATTGATGGAAAAGACATCAAGAAACTCAACTTGAAATCCCTGAGGAAACATATTGGTTTAGTGCAACAAGAACCGGCTCTTTTTGCAACATCGATATATGAAAACATTCTTTATGGAAAGGAAGGAGCTTCAGAAGCTGAAGTGATTGAAGCAGCTAAACTTGCCAATGCTCATAGCTTTATCAGTGGACTTCCTGAGGGCTACTCCACCAAAGTAGGTGAGAGAGGAGTTCAACTATCTGGTGGCCAGAAACAAAGGGTAGCTATTGCAAGGGCTGTTTTGAAAAACCCTGAAATTTTGCTGCTAGATGAAGCCACAAGTGCACTGGATTTGGAGTCAGAGCGTGTGGTGCAACAAGCTCTAGACCAATTGATGCAGAACAGAACAACAGTTATAGTGGCACATAGGCTATCCACAATAAAAAATGCAGACCAAATAGCAGTTTTAGAGGATGGAAAGATAATTCAGAGAGGGATTCATGCAAGACTTGTAGAAATCACAGATGGAGCATACTACAAATTAGTCAGCCTTCAACAACAAGAACAACATGTACAACAGCATTTTGATTAA 3708 0.4156 MSDGREKERKVPLLKLFSFADWYDCVLMGVGSVGACVHGASVPVFFVFFGKIINVIGFAYLSPKEASHEVAKYALDFVYLSIVILFSSWTEVACWMHTGERQAAKMRMAYLRSMMNQDITLFDTQASTGEVISSITTDIIVVQDALSEKVGNFMHYISRFIGGFVIGFVRVWQISLVTLAIVPLIAIAGGLYAYVTIGLIGKVRKAYVRAGEIAEEVIGNVRTVQAFAGEERAVRSYKAALMKTYRNGRKAGLAKGLGLGSMHCVLFLSWALLVWFNSIVVHKNIANGGDAFTTMLNVVISGLSLGQAAPDISAFIRAKASAYPIFEMIERDTMNKVSSENGQKLSKLEGHIQFKDVCFSYPSRPDVVIFNNFCLEIPPGKIVALVGGSGSGKSTVISLIERFYEPVSGQILLDGNTIRELDLKWLRQRIGLVNQEPALFATSIRENILYGKDDATLEEINQAVMLSDAQSFINNLPDGLDTQVGERGIQLSGGQKQRIAISRAIVKNPSILLLDEATSALDAESEKSVQEALDRVMVGRTTVIVAHRLSTIRNADMIVVIEGGKVVEIGNHEELISNPNNVYASLVQIQETAFSQGHLSVDPFLGGSSRRLGESSSCTTSFRGSFRSDKESTSRAFGDRVESVGTSRHVSVKRLYSMIGPDWPYGVFGTLGAFIAGAQMPLFALGISHALVSYYMDWDTTRHEVKKVAFLFCGAAVLTITAHAIEHLSFGIMGERLTLRAREKMFSAILKSEISWFDDINNTSSMLSSRLETDATFLRTIIVDRSTILLQNVGLVVTSFIVAFMLNWRITLVVLATYPLIISGHISEKLFMQGFGGNLSKAYLKANMLAGEAVSNIRTVAAFCAEQKVLDLYANELVEPSKRSFNRGQIAGIFYGISQFFIFSSYGLALWYGSVLMEKEISSFKSIMKSFMVLIVTALAMGETLALAPDLLKGNQMVASIFEVMDRKTGILGDIGEELKTVEGTIELKGIRFNYPSRPEVVIFNNFNLKVPAGKNIALVGHSGCGKSSVISLILRFYDPTFGKVMIDGKDIKKLNLKSLRKHIGLVQQEPALFATSIYENILYGKEGASEAEVIEAAKLANAHSFISGLPEGYSTKVGERGVQLSGGQKQRVAIARAVLKNPEILLLDEATSALDLESERVVQQALDQLMQNRTTVIVAHRLSTIKNADQIAVLEDGKIIQRGIHARLVEITDGAYYKLVSLQQQEQHVQQHFD* 1236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2922 1235 ProSitePatterns ABC transporters family signature. 1125 1139 IPR017871 GO:0005524
Pvu3g2922 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 980 1224 IPR027417 -
Pvu3g2922 1235 SUPERFAMILY ABC transporter transmembrane region 653 967 IPR036640 GO:0005524|GO:0016021
Pvu3g2922 1235 PANTHER ABC TRANSPORTER B FAMILY PROTEIN 8 1228 - -
Pvu3g2922 1235 Pfam ABC transporter transmembrane region 668 939 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g2922 1235 Pfam ABC transporter transmembrane region 33 301 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g2922 1235 Pfam ABC transporter 1005 1153 IPR003439 GO:0005524
Pvu3g2922 1235 Pfam ABC transporter 371 519 IPR003439 GO:0005524
Pvu3g2922 1235 CDD ABC_MTABC3_MDL1_MDL2 986 1221 - -
Pvu3g2922 1235 CDD ABC_6TM_Pgp_ABCB1_D2_like 656 971 - -
Pvu3g2922 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 30 317 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g2922 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 352 588 IPR003439 GO:0005524
Pvu3g2922 1235 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 590 IPR027417 -
Pvu3g2922 1235 CDD ABC_6TM_Pgp_ABCB1_D1_like 28 325 - -
Pvu3g2922 1235 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 667 953 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g2922 1235 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 8 1228 IPR039421 -
Pvu3g2922 1235 Gene3D ABC transporter type 1, transmembrane domain 76 962 IPR036640 GO:0005524|GO:0016021
Pvu3g2922 1235 Gene3D - 350 620 IPR027417 -
Pvu3g2922 1235 SMART AAA_5 379 573 IPR003593 -
Pvu3g2922 1235 SMART AAA_5 1013 1211 IPR003593 -
Pvu3g2922 1235 SUPERFAMILY ABC transporter transmembrane region 8 322 IPR036640 GO:0005524|GO:0016021
Pvu3g2922 1235 CDD ABC_MTABC3_MDL1_MDL2 352 590 - -
Pvu3g2922 1235 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 986 1222 IPR003439 GO:0005524
Pvu3g2922 1235 ProSitePatterns ABC transporters family signature. 491 505 IPR017871 GO:0005524
Pvu3g2922 1235 Gene3D - 976 1235 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2922 Pvu-Chr3 50997631 51006283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2922 30 617 Calmodulin-binding Proteins AT2G36910 37.919 1.09e-112 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2922 K05658 - gmx:100809752 2170.97