Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2915 ATGGAGGGAGCGGGCAGTGGCGGCGGAGAAGTGTCGACGGCGGCGCCGACACCGATTCCGAACGCGAACGCGCCGCCGCCTTTCCTGAGCAAGACGTACGACATGGTGGACGACCCTTCGACGGACTCGATTGTGTCGTGGAGTCCGGCGAACAACAGCTTCATTGTTTGGAACCCTCCGGAGTTCGCCAGAGACCTTTTGCCCAAACACTTCAAGCACAATAACTTCTCCAGTTTCGTTCGCCAGTTAAACACCTACGGTTTTAGGAAGGTAGACCCAGATCGCTGGGAATTTGCAAATGAGGGATTTTTAAGGGGTCAAAAGCACCTGCTTAAGACTATATCTCGGCGGAAACCTGCCCACGGTCATAGTCATCAACAAGCACAACAAGTACATGGACAGAGTTCATCCGTTGGAGCTTGTGTAGAAGTTGGGAAGTTTGGACTTGAGGAAGAGGTTGAGATTCTCAAGAGAGATAAGAATGTGCTCATGCAAGAGCTTGTGAGATTGAGGCAGCAGCAACAATCTACTGATAACCAGCTGCAGACTATGGTTCAGCGCCTTCAGGGAATGGAGCAACGACAGCAACAAATGATGTCATTCCTTGCAAAGGCTGTTCAGAGCCCTGGTTTCTTAGCTCAATTTGTACAACAGCAAAATGAGAGTAATAGACGCATAACAGAGGCAAACAAAAAACGTCGACTGAAGCAGGAAGGTATTGGTGAAATGGAACATACGGCTACTTCTGATGGGCAAATTGTTAAATATCAACCCCTGATAAATGAAGCAGCAAAAGCAATGGTTAGGCAAATAATGAAATTGGATGCTTCTCGACTAGAATCTTTCAGTAATAACCCCGATAATTACTTGATTGGTGATGATCATTCATCACCATCCAGTGAAATGGACCGGGGAAACTCTTTGACTCGATCTTCTGGAGTAACACTTCAAGAGGTCCCTCCAACTAAAGTGATGTCTTCTTATGTTCCATCTGCAACAAGGACTCAAGGGCATGGTCCTTCAATATCTTCTCCTACTCAAACAGACGAAATCATGCCAGACCTTTCTACAATACCAGATATAGTGGCAGGAAATATTCTGGATATTCCTCAAGAAAATTACATGGCACCAGAGACGGGTGGTGACGGATACATGGATCCTGCTTCATTTGGAGTAGATATGTCACTGCCCCTTGATTTTAATAGTATTTCACCTGAACCAGATATCGATGATTTGTTGAACAATCCTAACTTTTGGGATGATATTGTGCGAACTCCAGTGTCAGAGGATATTGAAACGAATGGTGGTGAATTATTCATGGAGAATGAGCTGCAGCCAAGTGAAAATGGATGGGAAAAATCTCAACATATGGACCTGCTTACTGAGCAGATGGGCCTACTTTCTTCTGATGTAGAGAAAAGTTGA 1425 0.4533 MEGAGSGGGEVSTAAPTPIPNANAPPPFLSKTYDMVDDPSTDSIVSWSPANNSFIVWNPPEFARDLLPKHFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKHLLKTISRRKPAHGHSHQQAQQVHGQSSSVGACVEVGKFGLEEEVEILKRDKNVLMQELVRLRQQQQSTDNQLQTMVQRLQGMEQRQQQMMSFLAKAVQSPGFLAQFVQQQNESNRRITEANKKRRLKQEGIGEMEHTATSDGQIVKYQPLINEAAKAMVRQIMKLDASRLESFSNNPDNYLIGDDHSSPSSEMDRGNSLTRSSGVTLQEVPPTKVMSSYVPSATRTQGHGPSISSPTQTDEIMPDLSTIPDIVAGNILDIPQENYMAPETGGDGYMDPASFGVDMSLPLDFNSISPEPDIDDLLNNPNFWDDIVRTPVSEDIETNGGELFMENELQPSENGWEKSQHMDLLTEQMGLLSSDVEKS* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2915 474 SUPERFAMILY "Winged helix" DNA-binding domain 23 117 IPR036390 -
Pvu3g2915 474 Gene3D - 21 118 IPR036388 -
Pvu3g2915 474 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g2915 474 Coils Coil 146 173 - -
Pvu3g2915 474 MobiDBLite consensus disorder prediction 283 322 - -
Pvu3g2915 474 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g2915 474 MobiDBLite consensus disorder prediction 227 246 - -
Pvu3g2915 474 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-1 5 343 - -
Pvu3g2915 474 MobiDBLite consensus disorder prediction 227 243 - -
Pvu3g2915 474 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g2915 474 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 5 343 IPR027725 -
Pvu3g2915 474 MobiDBLite consensus disorder prediction 1 26 - -
Pvu3g2915 474 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g2915 474 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g2915 474 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2915 Pvu-Chr3 50951530 50955595 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2915 7 468 HSF AT1G32330 56.813 1.52e-168 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pvu3g2915 HSF_DNA-bind 8.7e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2915 K09419 - gmx:732544 745.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2915 3 50951530 50955595 Pvu3g2915 3 50951530 50955595 ECH