Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2912 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCCTTGCAAATCACTCCTCCAAACAGTAAATCCACATCAAGTAATTGGAAGAGAAGCACAGAAGAGGAGATGGATTTGGGGTTCTGGAAGAGAGCTTTGGAATCCAAAACAACCACATCCTTAGTCAAAACAAACACATCCTTAGTCAAAACAGACCTCTCCCTCTCCAATCCAAGGCCTTCTTCTTCAAACACCAACATCCCCAACACCAACACCAACCTTATCCACCACTTCCAAAACAACATTAACAATAATAATGGCAACAACCCCATCCAACAAAACCATTTCTTTCAGCAAGACCTAGGTTTTCTGAGACCCATAAGAGGAATCCCTGTGTACCAAAACCCTTCTCTCTCATTTCCTCATCCACATGCTCCATCCAACACACCAACACCTTCAAACCCTTTCCTTTCCCAACCTCTCATCAACTCAAGGTTCCTCTCACGCTTTCCTCCCAAGCGTCACATGAGGGCTCCCAGGATGCGTTGGACCACCACACTCCATGCTCGCTTCGTCCATGTCGTTCAACTTTTGGGTGGCCATGAAAGGGCTACACCCAAATCAGTTCTTGAGCTAATGGATGTAAAGGATCTCACTTTAGCACATGTTAAGTCTCACCTGCAGATGTACCGAACAGTGAAAACTACTGATAGAGCTGCAGCATCATCAGGGCAATGTGATGCTTATGATAATGGGTCTTCTGGAGATACTTCTGAAGAGTCTCCAAGGATTAAGCAGGCAAGAACAAGTGTTAATGAAGATAATGAAAATGGTGGCCTTTGGGACAACTCTTCAAGGGAAGCTTGGTTGCATGGCAAGCCAAAGGTTGATTCTATTGGGAACGTGCCTTCTGTTGAGGGAATGGATCCAAAGGGCCAAAGCAATGAAATATCAGATGGAAACTCATCTTCAAACACTCCAGAAACAAGTGCCAAGAAGCCAAATTTGGATTTGGAGTTCACCTTAGGTCGATCACTTTGA 1011 0.4481 MELFPAQPDLSLQITPPNSKSTSSNWKRSTEEEMDLGFWKRALESKTTTSLVKTNTSLVKTDLSLSNPRPSSSNTNIPNTNTNLIHHFQNNINNNNGNNPIQQNHFFQQDLGFLRPIRGIPVYQNPSLSFPHPHAPSNTPTPSNPFLSQPLINSRFLSRFPPKRHMRAPRMRWTTTLHARFVHVVQLLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQCDAYDNGSSGDTSEESPRIKQARTSVNEDNENGGLWDNSSREAWLHGKPKVDSIGNVPSVEGMDPKGQSNEISDGNSSSNTPETSAKKPNLDLEFTLGRSL* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2912 336 SUPERFAMILY Homeodomain-like 166 222 IPR009057 -
Pvu3g2912 336 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 335 - -
Pvu3g2912 336 MobiDBLite consensus disorder prediction 304 322 - -
Pvu3g2912 336 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 169 222 IPR006447 GO:0003677
Pvu3g2912 336 MobiDBLite consensus disorder prediction 11 25 - -
Pvu3g2912 336 MobiDBLite consensus disorder prediction 1 31 - -
Pvu3g2912 336 MobiDBLite consensus disorder prediction 227 336 - -
Pvu3g2912 336 Pfam Myb-like DNA-binding domain 170 221 IPR001005 -
Pvu3g2912 336 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 335 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pvu3g2912 336 MobiDBLite consensus disorder prediction 227 250 - -
Pvu3g2912 336 Gene3D - 168 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2912 Pvu-Chr3 50915374 50921578 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2912 1 333 G2-like Transcription Factor Family AT4G17695 41.417 8.56e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pvu3g2912 Myb_DNA-binding 2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2912 - - pvu:PHAVU_003G283000g 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2912 3 50915374 50921578 Pvu3g2912 3 50915374 50921578 ECH
Pvu2g1415 2 27029191 27034429 Pvu3g2912 3 50915374 50921578 PCT