LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g2907	ATGGCTCGCTCTGTGTCTTTTGTCTCAACCATCTTCGTCTTTCTTCTGCTTCTTCTCGCCACTGAGATGGGACCAAGAATGGTGGCGGAGGCAAGAACTTGTGAGTCTCAGAGCCACCGTTTCAAGGGACCATGTGTGAGTGACACCAACTGTGCTTCTGTCTGCCGAACTGAACGTTTCAGCGGAGGACACTGCCGTGGCTTCCGTCGTAGATGCTTCTGCACCAAACACTGTTAA	237	0.519	MARSVSFVSTIFVFLLLLLATEMGPRMVAEARTCESQSHRFKGPCVSDTNCASVCRTERFSGGHCRGFRRRCFCTKHC*	79

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu3g2907	78	PANTHER	DEFENSIN-LIKE PROTEIN P322	1	78	-	-
	Pvu3g2907	78	PANTHER	DEFENSIN-LIKE PROTEIN 1	1	78	-	-
	Pvu3g2907	78	CDD	Knot1	43	75	IPR003614	GO:0006952
	Pvu3g2907	78	Pfam	Gamma-thionin family	32	78	-	-
	Pvu3g2907	78	ProSitePatterns	Gamma-thionins family signature.	32	55	IPR008176	GO:0006952
	Pvu3g2907	78	Gene3D	-	32	78	IPR036574	-
	Pvu3g2907	78	SUPERFAMILY	Scorpion toxin-like	32	78	IPR036574	-
	Pvu3g2907	78	SMART	gth_4	33	78	IPR003614	GO:0006952
	Pvu3g2907	78	PRINTS	Purothionin signature	33	48	IPR008176	GO:0006952
	Pvu3g2907	78	PRINTS	Purothionin signature	63	77	IPR008176	GO:0006952

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu3g2907	Pvu-Chr3	50826292	50826889	Tandem

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu3g2907	1	78	Plant Defensins Gene Families	AT2G02130	61.538	4.34e-31	102

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g2907	-		-	gmx:547843	142.895

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