Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2907 ATGGCTCGCTCTGTGTCTTTTGTCTCAACCATCTTCGTCTTTCTTCTGCTTCTTCTCGCCACTGAGATGGGACCAAGAATGGTGGCGGAGGCAAGAACTTGTGAGTCTCAGAGCCACCGTTTCAAGGGACCATGTGTGAGTGACACCAACTGTGCTTCTGTCTGCCGAACTGAACGTTTCAGCGGAGGACACTGCCGTGGCTTCCGTCGTAGATGCTTCTGCACCAAACACTGTTAA 237 0.519 MARSVSFVSTIFVFLLLLLATEMGPRMVAEARTCESQSHRFKGPCVSDTNCASVCRTERFSGGHCRGFRRRCFCTKHC* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2907 78 PANTHER DEFENSIN-LIKE PROTEIN P322 1 78 - -
Pvu3g2907 78 PANTHER DEFENSIN-LIKE PROTEIN 1 1 78 - -
Pvu3g2907 78 CDD Knot1 43 75 IPR003614 GO:0006952
Pvu3g2907 78 Pfam Gamma-thionin family 32 78 - -
Pvu3g2907 78 ProSitePatterns Gamma-thionins family signature. 32 55 IPR008176 GO:0006952
Pvu3g2907 78 Gene3D - 32 78 IPR036574 -
Pvu3g2907 78 SUPERFAMILY Scorpion toxin-like 32 78 IPR036574 -
Pvu3g2907 78 SMART gth_4 33 78 IPR003614 GO:0006952
Pvu3g2907 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Pvu3g2907 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2907 Pvu-Chr3 50826292 50826889 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2907 1 78 Plant Defensins Gene Families AT2G02130 61.538 4.34e-31 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2907 - - gmx:547843 142.895