Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2906 ATGGCTCGCTCTGTGTCTTTCGTCTCAACCATCTTCGTCTTTCTTCTGCTTCTGCTCGCCACTGAGATGGGACCAAGAATGGTGGCGGAGGCAAGAGGTTGTGAGTCTCGGAGCCGCCATCTCAGGGGAAAATGTGAGAGTGACGAGAACTGTGCTTCTGCCTGCCGAACTGAACGTTTCAGCGGAGGACACTGCCGTGGCTTCCGTTGTAGATGCTTCTGCGACAAACGCTCTTAG 237 0.5443 MARSVSFVSTIFVFLLLLLATEMGPRMVAEARGCESRSRHLRGKCESDENCASACRTERFSGGHCRGFRCRCFCDKRS* 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2906 78 SMART gth_4 33 74 IPR003614 GO:0006952
Pvu3g2906 78 CDD Knot1 43 75 IPR003614 GO:0006952
Pvu3g2906 78 Pfam Gamma-thionin family 33 76 - -
Pvu3g2906 78 SUPERFAMILY Scorpion toxin-like 33 76 IPR036574 -
Pvu3g2906 78 PRINTS Purothionin signature 33 48 IPR008176 GO:0006952
Pvu3g2906 78 PRINTS Purothionin signature 63 77 IPR008176 GO:0006952
Pvu3g2906 78 PANTHER DEFENSIN-LIKE PROTEIN 1 1 76 - -
Pvu3g2906 78 Gene3D - 32 77 IPR036574 -
Pvu3g2906 78 PANTHER DEFENSIN-LIKE PROTEIN P322 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2906 Pvu-Chr3 50811353 50811936 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2906 1 76 Plant Defensins Gene Families AT2G02130 48.684 3.13e-20 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2906 - - gmx:100798577 112.079