Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2900 ATGAGTGGTGACAGGAAGAGGAAGCTGCGTTTAAGTAAGATCTACTCATTCGCATGCTGCAAGGCATCTTTCAAGGGAGATGATTCACAGATTGGAGGAAAAGGTTATTCCAGGGTAGTGCTCTGCAATGAGCCAGATATCTCTGAGGATGGTGTTAGGAATTTTGCAGATAATTCTGTCAGATCTACAAAGTATACTCCTGCAACTTTCTTTCCCAAATCTCTGTTTGAACAGTTTAGGAGGGTGGCAAACTTCTATTTTTTGGTCACTGGCACATTGGCCTTCACAAAACTTGCTCCATATACTGCTGTCAGTGCTATCCTTCCACTGATTATTGTTATTGGGGCAACTATGGTGAAAGAAGGTATCGAAGACTGGCGCAGGAAAAAACAGGATACTGAGGTGAACAATAGAACAGTTAAAGTTCATAGTGTTGATGGCATTTTTAAACATACTGCATGGAAGAATCTGAAGGTGGGGAATATAGTGAAGGTAGAGAAGGATGAGTTCTTCCCAGGTGACCTCCTGTTGCTTTCATCCAGTTATGAGGATGCAGTTTGCTATGTTGAGACAATGAACTTGGATGGGGAGACAAATTTAAAGCTAAAACAAGGGTTAGAGATAACATCTTCCTTACAGGAGGATCTTAACTTCCAAAATTTTAAAGCTACAGTCAAATGTGAAGACCCCAATGCAAATTTGTATTCATTTGTTGGAAGCATGGAGTTTGAAGAGAAAAACTATGCCCTCTCTCCTCAGCAACTTCTTCTCCGTGACTCTAAACTTCGTAATACAGATTACATTTTTGGAGCTGTCATTTTCACTGGTCATGACACTAAGGTCATTCAAAATTCTACTGACCCACCTTCAAAAAGAAGCAGAATCGAGAAGAAGATGGACAAAGTCATCTATTTCTTGTTTTGTATTTTGTTTCTAATGGCATTTGTTGGATCTATTTTCTTTGGCATTGCAACTGAAGATGACTTCCAAAATGGGTTGATGAAAAGATGGTATTTAAGACCTGATGATTCTACTGTTTTCTTTGACCCAAAAAGACCAACTGCTGCTGCTTTATTTCATTGTTTGACAGCCTTAATGTTATATGGGTTCTTTATTCCCATCTCTTTGTATGTGTCAATAGAAATGGTCAAAGTTCTTCAGAGTATTTTCATCAATCAAGATATCCATATGTACTACAAGGAAGCAGACAAACCAGCCCGAGCTCGTACTTCAAACTTGAACGAGGAGCTTGGGCAGGTTGATACAATACTTTCTGACAAGACTGGAACTCTGACCTGCAACTCAATGGAGTTCATCAAATGTTCTATAGCTGGGGTAGCATATGGCTGTGGTGCTACAGAGGTTGAGAAGGCCATGGGCAGAAGAAAAGGTTCACCACGAATTCATGAGCATGATATTGAATCAGAAGCGCATAATATAAGGGGTTCGCTAGATAAAAAAACACTTATTAAAGGTTTTAACTTTGATGACGAAAGAATAAGAGATGGACATTGGGTTAATGAGCCTCATGCAGATGTTATCCAGAAGTTTTTGCGCGTGTTGGCAGTCTGTCATACAGCCATACCAGAAGTGAATGATGACACCGGAAAGGTTTCATATGAGGCTGAATCCCCAGATGAAGCTGCATTTCTAATTGCTGCAAGAGAACTTGGTTTTGAATTCTATGGAAGGGGTCAGACTAGTTTATCGACATTTGAGTTGGATCCAGTTTCTAGAAATAAAGTTGAAAGGAAATACAAGCTTCTCAGTGTTTTAGAATTCAATAGCTCAAGGAAGCGAATGTCAGTGATAGTGGAAGATGAAGAAGGGAAAATTTTGCTTCTCTGCAAAGGCGCAGACAGCATCATGTTTGAAAGGCTTGCCAAGAATGGGAGGGAGTTTGAAGAAAAAACCATGGAGCATGTGCATGAATATGCTGATGCAGGTCTGAGAACCCTTATACTGGCTTATCGTGAACTTGGCACAGAAGAGTACAAGGAGTTCGATGATAAATTCTCTAAGGCCAAGAATTCAGTCAGTGCTGATCAGGAGAGACTGATTGAGGAGGTATCAGATAAGATTGAGAATAACCTGATCCTTCTTGGTGCCACTGCTGTAGAGGACAAGCTCCAAGATGGGGTTCCTGATTGCGTTGACAAGCTTGCTCAAGCTGGAATTAAAATTTGGGTTTTGACTGGGGATAAAATGGAGACTGCAATCAATATTGGTTTTGCCTGCAGTTTACTTAGACAAGGGATGAAGCAGATTATAATTAATTTGGATAGTCCAGAAATTCAAGCACTAGAGAAAGATGGGGACAAGATGGCCATTGCCAAGGCATCAAGGCAAAGTGTCCTCCTTCAGATATCTGAAGGTGCTGCACAACTTGTTGCATACAGAGGGAGCTCTCAGAAGGCATTTGCTCTGATTATTGATGGAAAATCACTTGTTTATGCTTTAGAAGACAATATGAAGAACATGTTTCTGGAGCTAGCGATTCATTGTGCATCTGTTATTTGTTGTCGCTCATCCCCAAAGCAGAAGGCACTGGTCACTAGATTGGTCAAATCTGGAACTGGGAAAACAACCTTAGCCATTGGGGATGGAGCTAACGATGTGGGAATGCTTCAAGAAGCAGATATAGGAGTTGGTATAAGTGGTGTTGAAGGAATGCAGGCAGTTATGTCTAGTGATATTGCAATTGCACAATTCCGGTATTTGGAACGATTACTTCTGGTTCACGGACATTGGTGTTACAGAAGAATCTCGTCTATGATATGCTACTTTTTCTACAAGAATATCACATTTGGTTTCACTCTATTCTTATATGAGGTGTATGCATCATTCTCTGGACAACCCGCATACAATGACTGGTTGTTGTCTCTCTATAATGTCTTCTTTTCATCACTTCCTGTGGTTGCACTTGGGGTGTTTGATCAGGATGTTTCCGCTCGGTACTGCCTCAAGTTTCCTTTGTTATATCAAGAAGGAGTAGAGAATGTTCTGTTCAGCTGGCGTAGAATACTGAGCTGGATGCTTAATGGATTTATCAGTGCCATAATAATTTTCTTCTTCTGCACAAAAGCGATGGAGCTCCAAGCCTTCGATGCAGAGGGGAGAACTGCTGGAAAGGATATACTGGGGGTAACAATGTACAACTGTGTAGTTTGGGTTGTAAACTTGCAAATGGCACTAGCTATAAGCTACTTCACCATGATCCAACATTTTTTCATCTGGGGTTCCATTTTTTTCTGGTATCTTTTTCTCATGGTATATGGAGCAATGCCTTCACACTTTTCTACAAATGCTTACAAAGTCTTCATTGAAGCACTTGCTCCTTCTCCTTCCTATTGGCTTGTGACATTCTTTGTGGTGATCTCAACCCTCATACCATACTTCTCCTACGCAGCAATTCAGATGCGGTTCTTTCCCATGTATCATGAAATAGTACAATGGATAAGATATGAAGGGAATATTAAGGATCCTGAGTTTTGTGATATGGTGCGGCAGATATCATTGCGGCCAACAACCGTAGGTTCAACAGCACGCTTAGCTGCCACGGCTCACCACGTAAGAGACAGAAATGTTAAAAACGGTAGATAA 3603 0.4083 MSGDRKRKLRLSKIYSFACCKASFKGDDSQIGGKGYSRVVLCNEPDISEDGVRNFADNSVRSTKYTPATFFPKSLFEQFRRVANFYFLVTGTLAFTKLAPYTAVSAILPLIIVIGATMVKEGIEDWRRKKQDTEVNNRTVKVHSVDGIFKHTAWKNLKVGNIVKVEKDEFFPGDLLLLSSSYEDAVCYVETMNLDGETNLKLKQGLEITSSLQEDLNFQNFKATVKCEDPNANLYSFVGSMEFEEKNYALSPQQLLLRDSKLRNTDYIFGAVIFTGHDTKVIQNSTDPPSKRSRIEKKMDKVIYFLFCILFLMAFVGSIFFGIATEDDFQNGLMKRWYLRPDDSTVFFDPKRPTAAALFHCLTALMLYGFFIPISLYVSIEMVKVLQSIFINQDIHMYYKEADKPARARTSNLNEELGQVDTILSDKTGTLTCNSMEFIKCSIAGVAYGCGATEVEKAMGRRKGSPRIHEHDIESEAHNIRGSLDKKTLIKGFNFDDERIRDGHWVNEPHADVIQKFLRVLAVCHTAIPEVNDDTGKVSYEAESPDEAAFLIAARELGFEFYGRGQTSLSTFELDPVSRNKVERKYKLLSVLEFNSSRKRMSVIVEDEEGKILLLCKGADSIMFERLAKNGREFEEKTMEHVHEYADAGLRTLILAYRELGTEEYKEFDDKFSKAKNSVSADQERLIEEVSDKIENNLILLGATAVEDKLQDGVPDCVDKLAQAGIKIWVLTGDKMETAINIGFACSLLRQGMKQIIINLDSPEIQALEKDGDKMAIAKASRQSVLLQISEGAAQLVAYRGSSQKAFALIIDGKSLVYALEDNMKNMFLELAIHCASVICCRSSPKQKALVTRLVKSGTGKTTLAIGDGANDVGMLQEADIGVGISGVEGMQAVMSSDIAIAQFRYLERLLLVHGHWCYRRISSMICYFFYKNITFGFTLFLYEVYASFSGQPAYNDWLLSLYNVFFSSLPVVALGVFDQDVSARYCLKFPLLYQEGVENVLFSWRRILSWMLNGFISAIIIFFFCTKAMELQAFDAEGRTAGKDILGVTMYNCVVWVVNLQMALAISYFTMIQHFFIWGSIFFWYLFLMVYGAMPSHFSTNAYKVFIEALAPSPSYWLVTFFVVISTLIPYFSYAAIQMRFFPMYHEIVQWIRYEGNIKDPEFCDMVRQISLRPTTVGSTARLAATAHHVRDRNVKNGR* 1201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2900 1200 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 835 948 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu3g2900 1200 SFLD Haloacid Dehalogenase 408 917 - -
Pvu3g2900 1200 SFLD p-type atpase 408 917 IPR044492 -
Pvu3g2900 1200 Gene3D - 567 701 IPR023299 GO:0000166
Pvu3g2900 1200 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1144 IPR023298 -
Pvu3g2900 1200 SUPERFAMILY HAD-like 419 921 IPR036412 -
Pvu3g2900 1200 Gene3D - 702 906 IPR023214 -
Pvu3g2900 1200 Pfam Phospholipid-translocating ATPase N-terminal 42 106 IPR032631 -
Pvu3g2900 1200 CDD P-type_ATPase_APLT_Dnf-like 57 1015 - -
Pvu3g2900 1200 ProSitePatterns E1-E2 ATPases phosphorylation site. 426 432 IPR018303 -
Pvu3g2900 1200 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 1 1194 - -
Pvu3g2900 1200 Gene3D - 116 286 - -
Pvu3g2900 1200 Pfam Cation transport ATPase (P-type) 523 627 - -
Pvu3g2900 1200 SUPERFAMILY Calcium ATPase, transduction domain A 139 283 IPR008250 -
Pvu3g2900 1200 PANTHER PHOSPHOLIPID-TRANSPORTING ATPASE 1 1194 - -
Pvu3g2900 1200 Pfam Phospholipid-translocating P-type ATPase C-terminal 894 1144 IPR032630 -
Pvu3g2900 1200 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 55 1151 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016021|GO:0140326
Pvu3g2900 1200 PRINTS P-type cation-transporting ATPase superfamily signature 424 438 - -
Pvu3g2900 1200 PRINTS P-type cation-transporting ATPase superfamily signature 866 885 - -
Pvu3g2900 1200 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 500 703 IPR023299 GO:0000166
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2900 Pvu-Chr3 50748196 50755662 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2900 9 1192 Primary Pumps ATPases AT1G68710 73.784 0.0 1883