Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2891 TGTGTGTTTGTGCAGGGAAATTGGACCATTGAGTATACCAGACTCAAGGCAAAGATTGACCTTTTGCAGAGAAACCATAGGCACTATATGGGAGAAGATTTAGGATCAATGAGCCTGAAAGAGCTTCAGAGTCTGGAACAGCAGTTAGATACTGCTCTCAAACAAATTCGTACACGCAGAAACCAACTCATGTACGAGTCAATTTCTGAGCTTCAGAAGAAGGAGAAAGTGATACAGGAGCAGAATAACATGCTTGCAAAGAAGATCAAGGAGAAAGAAAAGGTTGCAGCACAGCAGGCACAGTGGGAGCATCCAAACCATGGAGTCAATGCATCTTTCTTGCTACCACAGCCACTTCTGAACATGGGTGGCAATTATCGTGAGGAAGCACAAGAAGTAGGGAGGAATGAACTTGACCTCACTCTGGAACCCTTGTATTCCTGCCACCTTGGATGCTTCTGA 462 0.4481 CVFVQGNWTIEYTRLKAKIDLLQRNHRHYMGEDLGSMSLKELQSLEQQLDTALKQIRTRRNQLMYESISELQKKEKVIQEQNNMLAKKIKEKEKVAAQQAQWEHPNHGVNASFLLPQPLLNMGGNYREEAQEVGRNELDLTLEPLYSCHLGCF* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2891 153 Pfam K-box region 6 89 IPR002487 GO:0003700|GO:0005634|GO:0006355
Pvu3g2891 153 PANTHER SERUM RESPONSE FACTOR HOMOLOG 6 136 - -
Pvu3g2891 153 Coils Coil 39 62 - -
Pvu3g2891 153 Coils Coil 68 98 - -
Pvu3g2891 153 PANTHER TRUNCATED TRANSCRIPTION FACTOR CAULIFLOWER A 6 136 - -
Pvu3g2891 153 ProSiteProfiles K-box domain profile. 5 95 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2891 Pvu-Chr3 50655820 50658360 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2891 4 153 MADS-box Gene Family AT1G69120 60.714 1.89e-58 178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2891 K09264 - gmx:100810129 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu8g0284 8 2299894 2307811 Pvu3g2891 3 50655820 50658360 ECH
Pvu3g2891 3 50655820 50658360 Pvu3g2891 3 50655820 50658360 ECH