Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2884 ATGGAGTTTGAGAAAAACGGAAGTGTGACGATTCGCGAGATTTGCGGGAATGGAAGTTGCATGAAAGTGACAGAACTTGAGGCCAAACTTGATGCAGGAAATGTTGAAGAAGCAGAAGCAACATTGCGTAATGGGTTATCAATAAGTTCCGAGGAAGCAAAGGCTCTTCTTGGAAAATTAGAGTATCAAAGAGGTAATGTGGAGAATGCCTTTCGAGTGTTTGATGGAATTGATCTTCAACCAATCATACAACAATTACAAACTTCCCTTTCGGACAAAACACCTGCGAAGAATACTTTAACGTTTGAAGCCATCTACCTAAAAGCCAAGTGTTTACAAAAGTTGAACAAATGTACAGAAGCTATTGATGGGTGTAAGAGTGTTCTGGATGCTGTTGAGAAGACATATAGTCAGGGTAAAGTTGATACACAAGGCGACAATAAATTGCAGGAGATAGTGAGTCATGTAGTGGAGCTCCTTCCAGAGCTTTGGAAGGAGACTGGGTGCTATGATGAGGCATTGTCAGCTTATAGGAATGCCCTACTTGGTCAATGGAACCTTGATAATGAATTTTGTGCAAGAATTCAGAAGGCACTTGCTGTGTTTTTGTTGTACAGTGAAGTGGAGGCAAGTCCACCTAACAAGACCGATGGGTCTTATGTACCCAAAAACAATATGGAAGAAGCAGTTCTTCTTTTACTGATTATTTTGAGAAACTTCGTCCTTGGTAAGATAAAGTGGGATCCTTCAATTATGGAACACCTGGTTTTCACACTTTCAACATGTGGAGAAACCTCTATTCTAGCAAAGCAATTTGAAGAGTTGACACCTGGTACATATCAACGCATTGATCGTTGGATTTTTTTAGCTCTGTGTAACAGTGGAGCTGGAGAAAATAATACTGCTTTGAATCTGCTTAGGATGTCTTTGCATAAACATGAACGACCAGATGACCTGATAGCATTATTATTGGCTGCCAGAATTTGTAGTGAGGATCCTCATCTTGGTGCTGAGGGAGCAGGTTATGCACAAAGAGCAGTGAATAATGCCCAGGGATTAGATGGGCATTTGAAAGGTGTGGGTCTAAGGATGTTGGGACTTTGCCAAGGAATACAAGCTACGGTTTCTTCTTCTGACCATGAGAGGTCTGAGCTTCAATCTGAAGCTCTAAAATCATTGGAGAAGGCAATTCGATTGGAGCAGAACAATGCTGATCTCATTTTTGAATTGGCTATTCAATATGCTATGCACAGAAATTTGAGTGTTGCTTTATCATGTGCTAAACAGTTCTTTGACAAAACTGGTGGCTCTACACTAAAAGGGTGGAGATTGCTTGCTCTAGTTTTGTCTGCACAGAAAAGATTTACAGAGGCTGAAGTGGTCATTGATGCAGCTTTAGACGAGACTGCAAAATGGGAGCAGGGGCCACTACTCAGGCTGAAAGCCAAGTTGAAGAACTCTCAATTACGACCCATGGATGCTATTGAAATTTATCGGTACGTTCTTGCATTGGTTCAAGCCCAGAAGAAATCACCCGGGCCTCCTAAACAAGGTTCACAGGTGGATGATGCTAAGATAAATGAACTTGAAGTTTGGCATGGTTTGGCAAATTTATATGCAAACCTTTCTCACTGGAAGGATGCCGAAATCTGTTTGCAGAAGGCCAGAGAGTTAAAGGAATACTCACCAGCAACAACACACACGGAAGCTATTATGTTCGAAGGACGTGGAGAAAATTTAGAAGCTCTGACTGCTACTTTGAATGCAGTTCTGTTTGAACCAAACTATGTGCCAAGCAAGATCTTGATGGCTTCTTTGATACTGAAAATCGGTTTTAGTGCAGCTGCTTCTGTTGCTAGATGTCTACTTTGTGATGCACTTAGAATAGAACCCACCAACCGCATGGCTTGGTATTACTTGGGATTAACTCACAAGGCTGATGGTCGAATAACTGATGCTGCTGATTGCTTCCAAGCAGCTTCCTTGCTTGAAGAATCAGATCCCATTGAAACTTTTAGCTCTATGATTTGA 2031 0.4151 MEFEKNGSVTIREICGNGSCMKVTELEAKLDAGNVEEAEATLRNGLSISSEEAKALLGKLEYQRGNVENAFRVFDGIDLQPIIQQLQTSLSDKTPAKNTLTFEAIYLKAKCLQKLNKCTEAIDGCKSVLDAVEKTYSQGKVDTQGDNKLQEIVSHVVELLPELWKETGCYDEALSAYRNALLGQWNLDNEFCARIQKALAVFLLYSEVEASPPNKTDGSYVPKNNMEEAVLLLLIILRNFVLGKIKWDPSIMEHLVFTLSTCGETSILAKQFEELTPGTYQRIDRWIFLALCNSGAGENNTALNLLRMSLHKHERPDDLIALLLAARICSEDPHLGAEGAGYAQRAVNNAQGLDGHLKGVGLRMLGLCQGIQATVSSSDHERSELQSEALKSLEKAIRLEQNNADLIFELAIQYAMHRNLSVALSCAKQFFDKTGGSTLKGWRLLALVLSAQKRFTEAEVVIDAALDETAKWEQGPLLRLKAKLKNSQLRPMDAIEIYRYVLALVQAQKKSPGPPKQGSQVDDAKINELEVWHGLANLYANLSHWKDAEICLQKARELKEYSPATTHTEAIMFEGRGENLEALTATLNAVLFEPNYVPSKILMASLILKIGFSAAASVARCLLCDALRIEPTNRMAWYYLGLTHKADGRITDAADCFQAASLLEESDPIETFSSMI* 677
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2884 676 PANTHER CALMODULIN-BINDING PROTEIN 1 675 - -
Pvu3g2884 676 SUPERFAMILY TPR-like 524 660 IPR011990 GO:0005515
Pvu3g2884 676 SMART tpr_5 439 472 IPR019734 GO:0005515
Pvu3g2884 676 SMART tpr_5 529 562 IPR019734 GO:0005515
Pvu3g2884 676 SMART tpr_5 283 316 IPR019734 GO:0005515
Pvu3g2884 676 SMART tpr_5 102 135 IPR019734 GO:0005515
Pvu3g2884 676 SMART tpr_5 634 667 IPR019734 GO:0005515
Pvu3g2884 676 Gene3D Tetratricopeptide repeat domain 25 202 IPR011990 GO:0005515
Pvu3g2884 676 SUPERFAMILY TPR-like 387 591 IPR011990 GO:0005515
Pvu3g2884 676 Gene3D Tetratricopeptide repeat domain 510 669 IPR011990 GO:0005515
Pvu3g2884 676 Gene3D Tetratricopeptide repeat domain 219 509 IPR011990 GO:0005515
Pvu3g2884 676 SUPERFAMILY TPR-like 33 312 IPR011990 GO:0005515
Pvu3g2884 676 PANTHER PROTEIN NPG1 1 675 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2884 Pvu-Chr3 50585458 50589365 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2884 4 676 Calmodulin-binding Proteins AT2G43040 63.401 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2884 K21843 - gmx:100811897 1044.26