Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2877 ATGGAGAGGTACAAGTTAATTAAGGAAGTTGGTGATGGAACATTTGGGAGTGTTTGGAGAGCCATTAATAAGCAAAGTGGTGAAGTTGTTGCAATAAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACTTGAGAGAAGTCAAGTCATTGCGGAAAATGAATCATTCAAATATTGTGAAGCTGAAGGAAGTTATTCGAGAATGTGACACTTTGTGCCTTGTTTTTGAGTACATGGAATTCAACCTGTACCAACTTATGAAAAACAGGGAAAAGCTGTTTTCTGAAAATGATGTTAGAAATTGGTGTTTTCAAGTTTTCCAAGGTTTAGCTTATATGCACCAGCGTGGATACTTTCATCGTGATCTTAAACCAGAGAACTTGCTGGTCACTAAGGATGTCATAAAGATTGCTGATTTTGGCCTAGCCCGAGAGATCAGTTCACAACCACCCTATACAGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTCCTACTTCAATCCCATTTATATGGACCTAAAGTTGATATGTGGGCAATGGGTGCTATTATGGCTGAGTTGTTCACTCTACGTCCTCTATTCCCTGGTACCAGTGAAGCAGATGAGATCTACAAAATATGCAGTGTAATAGGTAGTCCAACAACTGAATCTTGGGCTGATGGACTCAAGCTTGCCAGGGATATCAACTATCAGTTTCCGCAGCATGCTAGTGTACATCTCTCTGCTCTTATCCCATCCAGAAGTGATAGTGCAATTAGCCTTGTTACATCACTTTGTTCATGGGATCCCTGCAAGAGACCAACAGCATCAGAGGCTCTTCAACATCCTTTCTTTCAGAGTTGCTTTTACATCCCTCCGTCCCTTCGCACAAGAGCCGTGACCAGAACTCCTCCATCTGCTGGGACCAGGGGTTCATTGGATCGGCAGGGGCTCAAGAGATACTCTAGTGCTTTGCCTAATACAAAAATCACAAACAATTTTTCTTCCCAAAAATTACATGCTTCTGTAACTTCAGGTGTGCAGCGGAAGCTGGATTTGGCAACCAAGGATGGAATTAAGAACAAGAAGCCATTGAAGACTACTACTCCACAATCAAAATATCGATTTACAGGAAAAGATAGCCCGACTGGTATGAACAAGGGGAGGAGTGTACGCGGGGTTTCAGAAAGCGCTGAGAAGTTGGCAAATATGTCCATCGGTACGCGAAGACAGTCCATGGGACAAAGCCGTCCACCGCCTCCAATGAAGACAGCCAATTGGATATCTGAATCACTCAGGTCCGGACAACAAAATCCAACTGAGAGAAGTTTGACAAGAAAAGTTGCAGGCTGA 1347 0.4298 MERYKLIKEVGDGTFGSVWRAINKQSGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHSNIVKLKEVIRECDTLCLVFEYMEFNLYQLMKNREKLFSENDVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDVIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSHLYGPKVDMWAMGAIMAELFTLRPLFPGTSEADEIYKICSVIGSPTTESWADGLKLARDINYQFPQHASVHLSALIPSRSDSAISLVTSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRTRAVTRTPPSAGTRGSLDRQGLKRYSSALPNTKITNNFSSQKLHASVTSGVQRKLDLATKDGIKNKKPLKTTTPQSKYRFTGKDSPTGMNKGRSVRGVSESAEKLANMSIGTRRQSMGQSRPPPPMKTANWISESLRSGQQNPTERSLTRKVAG* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2877 448 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Pvu3g2877 448 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 393 - -
Pvu3g2877 448 MobiDBLite consensus disorder prediction 358 448 - -
Pvu3g2877 448 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2877 448 CDD STKc_MAK_like 4 283 - -
Pvu3g2877 448 MobiDBLite consensus disorder prediction 425 442 - -
Pvu3g2877 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Pvu3g2877 448 MobiDBLite consensus disorder prediction 399 417 - -
Pvu3g2877 448 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2877 448 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
Pvu3g2877 448 MobiDBLite consensus disorder prediction 362 377 - -
Pvu3g2877 448 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Pvu3g2877 448 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2877 448 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Pvu3g2877 448 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 393 - -
Pvu3g2877 448 MobiDBLite consensus disorder prediction 297 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2877 Pvu-Chr3 50534621 50539055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2877 1 290 Core Cell Cycle Gene Families AT3G48750 36.364 1.61e-66 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Pvu3g2877 Pkinase 1.2e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2877 K08829 - gmx:100784474 817.379